RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 ZCCHC14Q8WYQ9 949 aaKnown RBP5.67□□□□□ -1.5
CBX3-208ENST00000497498 ZSWIM3Q96MP5 696 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 PHF20Q9BVI0 1012 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 JAM3Q9BX67 310 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 PDGFDQ9GZP0 370 aaPredicted RBP5.67□□□□□ -1.5
CBX3-208ENST00000497498 TMEM168Q9H0V1 697 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 L2HGDHQ9H9P8 463 aa5.67□□□□□ -1.5
CBX3-208ENST00000497498 R3HCC1Q9Y3T6 440 aaKnown RBP5.67□□□□□ -1.5
CBX3-208ENST00000497498 LAMTOR5O43504 91 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 CYP1A1P04798 512 aaPredicted RBP5.66□□□□□ -1.5
CBX3-208ENST00000497498 FGFR1P11362 822 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 ZNF20P17024 532 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 DNAJA1P31689 397 aaKnown RBP5.66□□□□□ -1.5
CBX3-208ENST00000497498 USP53Q70EK8 1073 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 PLEKHH3Q7Z736 793 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 PROSER1Q86XN7 944 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 PIP4K2CQ8TBX8 421 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 ARHGEF4Q9NR80 690 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 PPP4R1LQ9P1A2 415 aa5.66□□□□□ -1.5
CBX3-208ENST00000497498 PPARGC1AQ9UBK2 798 aaKnown RBP5.66□□□□□ -1.5
CBX3-208ENST00000497498 IQCA1LA6NCM1 817 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 COL6A1P12109 1028 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 TNFRSF1AP19438 455 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 GLB1LQ6UWU2 654 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 TMC5Q6UXY8 1006 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 LBX2Q6XYB7 198 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 OTOP3Q7RTS5 596 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 LIMS2Q7Z4I7 341 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 DCAF4Q8WV16 495 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 OSBP2Q969R2 916 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 AARSD1Q9BTE6 412 aaKnown RBP5.65□□□□□ -1.5
CBX3-208ENST00000497498 TMPRSS5Q9H3S3 457 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 CROTQ9UKG9 612 aa5.65□□□□□ -1.5
CBX3-208ENST00000497498 ZNF536O15090 1300 aa5.65□□□□□ -1.51
CBX3-208ENST00000497498 SLC27A2O14975 620 aa5.64□□□□□ -1.51
CBX3-208ENST00000497498 NTRK3Q16288 839 aa5.64□□□□□ -1.51
CBX3-208ENST00000497498 HABP4Q5JVS0 413 aaKnown RBP5.64□□□□□ -1.51
CBX3-208ENST00000497498 KLHL36Q8N4N3 616 aa5.64□□□□□ -1.51
CBX3-208ENST00000497498 DTX3Q8N9I9 347 aa5.64□□□□□ -1.51
CBX3-208ENST00000497498 ST13P5Q8NFI4 369 aaPredicted RBP5.64□□□□□ -1.51
CBX3-208ENST00000497498 ZFYVE21Q9BQ24 234 aa5.64□□□□□ -1.51
CBX3-208ENST00000497498 RBPJLQ9UBG7 517 aa5.64□□□□□ -1.51
CBX3-208ENST00000497498 CCDC9Q9Y3X0 531 aaKnown RBP5.64□□□□□ -1.51
CBX3-208ENST00000497498 PRODHO43272 600 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 PABPC1P11940 636 aaKnown RBP5.63□□□□□ -1.51
CBX3-208ENST00000497498 GRK2P25098 689 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 GRK3P35626 688 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 EPHB4P54760 987 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 KIZQ2M2Z5 673 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 STYK1Q6J9G0 422 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 KCNT2Q6UVM3 1135 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 KBTBD2Q8IY47 623 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 UHMK1Q8TAS1 419 aaKnown RBP5.63□□□□□ -1.51
CBX3-208ENST00000497498 IGDCC4Q8TDY8 1250 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 DVL3Q92997 716 aaPredicted RBP5.63□□□□□ -1.51
CBX3-208ENST00000497498 ZNF428Q96B54 188 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 ZNF669Q96BR6 464 aaPredicted RBP5.63□□□□□ -1.51
CBX3-208ENST00000497498 DLL4Q9NR61 685 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 FTSJ1Q9UET6 329 aa5.63□□□□□ -1.51
CBX3-208ENST00000497498 MATN3O15232 486 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 KLHL18O94889 574 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 CHGBP05060 677 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 FAHP16930 419 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 GPR85P60893 370 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 PPP2CBP62714 309 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 PPP2CAP67775 309 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 GRIN1Q05586 938 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 SPIRE1Q08AE8 756 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 NFATC3Q12968 1075 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 TUSC3Q13454 348 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 RAB33AQ14088 237 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 VASNQ6EMK4 673 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 TRMT10BQ6PF06 316 aaKnown RBP5.62□□□□□ -1.51
CBX3-208ENST00000497498 NSMFQ6X4W1 530 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 RBM12BQ8IXT5 1001 aaKnown RBP5.62□□□□□ -1.51
CBX3-208ENST00000497498 CHST13Q8NET6 341 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 DNERQ8NFT8 737 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.62□□□□□ -1.51
CBX3-208ENST00000497498 CD248Q9HCU0 757 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 ADAM29Q9UKF5 820 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 NUB1Q9Y5A7 615 aa5.62□□□□□ -1.51
CBX3-208ENST00000497498 NKRFO15226 690 aaKnown RBP eCLIP5.61□□□□□ -1.51
CBX3-208ENST00000497498 GPR42O15529 346 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 CKMP06732 381 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 COL6A2P12110 1019 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 EPHA5P54756 1037 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 ICAM4Q14773 271 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 PAN2Q504Q3 1202 aaKnown RBP5.61□□□□□ -1.51
CBX3-208ENST00000497498 IFNL3Q8IZI9 196 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 LRRC47Q8N1G4 583 aaKnown RBP5.61□□□□□ -1.51
CBX3-208ENST00000497498 BARX1Q9HBU1 254 aaPredicted RBP5.61□□□□□ -1.51
CBX3-208ENST00000497498 IGSF5Q9NSI5 407 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 ST6GALNAC2Q9UJ37 374 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 TELO2Q9Y4R8 837 aa5.61□□□□□ -1.51
CBX3-208ENST00000497498 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 NPEPPSL1A6NEC2 478 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 KNG1P01042 644 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms