RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CCSAPQ6IQ19 270 aaPredicted RBP21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 CYFIP1Q7L576 1253 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 FERMT3Q86UX7 667 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 ETNPPLQ8TBG4 499 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 SLC5A5Q92911 643 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 FAM20AQ96MK3 541 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 RIT2Q99578 217 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 SDF4Q9BRK5 362 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 BCAS3Q9H6U6 928 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 DNM1LO00429 736 aa21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 C6orf222P0C671 652 aaPredicted RBP21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 ZSCAN22P10073 491 aaPredicted RBP21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 FSCN1Q16658 493 aaKnown RBP21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 BRDTQ58F21 947 aaPredicted RBP21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 PCSK9Q8NBP7 692 aaKnown RBP21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 PPTC7Q8NI37 304 aa21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 TSEN34Q9BSV6 310 aaKnown RBP21.94■■□□□ 1.1
PCOLCE-208ENST00000487172 MYADML2A6NDP7 307 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 CCDC85CA6NKD9 419 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 ZEB2O60315 1214 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 ATP2B1P20020 1258 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 HSDL1Q3SXM5 330 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 POTEDQ86YR6 584 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 SPATA33Q96N06 139 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 PKD2L1Q9P0L9 805 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 SLC9A2Q9UBY0 812 aa21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 DAXXQ9UER7 740 aaPredicted RBP21.93■■□□□ 1.1
PCOLCE-208ENST00000487172 DOCK5Q9H7D0 1870 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 NEMFO60524 1076 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 PPFIA4O75335 1185 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 PSMD10O75832 226 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 BAG4O95429 457 aaKnown RBP21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 HOXD8P13378 290 aaPredicted RBP21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 MCM7P33993 719 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 DDIT3P35638 169 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 MNX1P50219 401 aaPredicted RBP21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 IRX5P78411 483 aaPredicted RBP21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 ZNF174Q15697 407 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 GNASQ5JWF2 1037 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 SLFN12Q8IYM2 578 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 AFG1LQ8WV93 481 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 HAS1Q92839 578 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 MTMR9Q96QG7 549 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 JPH1Q9HDC5 661 aaPredicted RBP21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 PCDHB6Q9Y5E3 794 aa21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
PCOLCE-208ENST00000487172 MOXD2PA6NHM9 499 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 KBTBD13C9JR72 458 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 KPNA6O60684 536 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 BRD1O95696 1058 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 F13A1P00488 732 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 MMP3P08254 477 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 EN2P19622 333 aaPredicted RBP21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 BEX3Q00994 111 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 PKP1Q13835 747 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 KCNA10Q16322 511 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 GPR20Q99678 358 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 POLR3EQ9NVU0 708 aa21.91■■□□□ 1.1
PCOLCE-208ENST00000487172 NOP56O00567 594 aaKnown RBP21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 ATG7O95352 703 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 KRT76Q01546 638 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 CALCRLQ16602 461 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 DGKDQ16760 1214 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 LRCH2Q5VUJ6 765 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 ZNF746Q6NUN9 644 aaPredicted RBP21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 B3GNT9Q6UX72 402 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 C4orf32Q8N8J7 132 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 SEPT1Q8WYJ6 367 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 TEKT3Q9BXF9 490 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 PHF24Q9UPV7 400 aa21.9■■□□□ 1.1
PCOLCE-208ENST00000487172 GSTTP1A0A1W2PQM5 241 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 LAD1O00515 517 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 SORBS3O60504 671 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 GAS7O60861 476 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 ASGR1P07306 291 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 NBR1Q14596 966 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 TMEM60Q9H2L4 133 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 ZDHHC9Q9Y397 364 aa21.89■■□□□ 1.09
PCOLCE-208ENST00000487172 ELP1O95163 1332 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 MARCH6O60337 910 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 CABYRO75952 493 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 CCNE2O96020 404 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 COL6A1P12109 1028 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 ACLYP53396 1101 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 ACTR2P61160 394 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 NUCB2P80303 420 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 PURAQ00577 322 aaKnown RBP21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 UBE2Q1Q7Z7E8 422 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 SMAP1Q8IYB5 467 aaPredicted RBP21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 UIMC1Q96RL1 719 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 TCEAL9Q9UHQ7 104 aa21.88■■□□□ 1.09
PCOLCE-208ENST00000487172 DDX39AO00148 427 aaKnown RBP21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 BMP15O95972 392 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 PTGDRQ13258 359 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 PPP2R5CQ13362 524 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 FAM173BQ6P4H8 233 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 ABHD15Q6UXT9 468 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 RDM1Q8NG50 284 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms