RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 EMID1Q96A84 441 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 LENG1Q96BZ8 264 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 ZFP91Q96JP5 570 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 FAM20AQ96MK3 541 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 TEKT3Q9BXF9 490 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 RAB34Q9BZG1 259 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 ZSCAN16Q9H4T2 348 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 C11orf49Q9H6J7 331 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 AZI2Q9H6S1 392 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 STARD7Q9NQZ5 370 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 PKD2L1Q9P0L9 805 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 ZNF215Q9UL58 517 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 CEP131Q9UPN4 1083 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 SAMM50Q9Y512 469 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 DDX49Q9Y6V7 483 aaKnown RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 CYP3A7-CYP3A51PA0A087WV96 503 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 A6NJR5 290 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 FAM86B1E9PN63 330 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 LAD1O00515 517 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 TLR3O15455 904 aaKnown RBP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 DKC1O60832 514 aaKnown RBP eCLIP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 PPFIA4O75335 1185 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 RGS20O76081 388 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ARIH2O95376 493 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 BMP15O95972 392 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ASGR1P07306 291 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 MMP3P08254 477 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 FAM86B2P0C5J1 330 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 KCNA2P16389 499 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SYT1P21579 422 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 CYP3A7P24462 503 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 U2AF2P26368 475 aaKnown RBP eCLIP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SFNP31947 248 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ACLYP53396 1101 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 NKX3-2P78367 333 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SP4Q02446 784 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ARHGAP1Q07960 439 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 KCNA10Q16322 511 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 CALCRLQ16602 461 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 TMEM266Q2M3C6 531 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 Q4G0T1 1027 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 TTC38Q5R3I4 469 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 FAM160B1Q5W0V3 765 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 MIS18BP1Q6P0N0 1132 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SMAP1Q8IYB5 467 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SPRYD3Q8NCJ5 442 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 KLHDC9Q8NEP7 349 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 AFG1LQ8WV93 481 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 CRYGNQ8WXF5 182 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 GLG1Q92896 1179 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 COPS5Q92905 334 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SHISA4Q96DD7 197 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 PAWRQ96IZ0 340 aaKnown RBP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 RIT2Q99578 217 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 MTG1Q9BT17 334 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 SENP6Q9GZR1 1112 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 AGO4Q9HCK5 861 aaKnown RBP7.21□□□□□ -1.26
SF3B1-206ENST00000462613 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ATP6V1DQ9Y5K8 247 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ELP1O95163 1332 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 ALPK3Q96L96 1907 aa7.21□□□□□ -1.26
SF3B1-206ENST00000462613 MYH11P35749 1972 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 HTTP42858 3142 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 IGLV3-22A0A075B6J6 115 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 A0A0U1RQG5 324 aaPredicted RBP7.2□□□□□ -1.26
SF3B1-206ENST00000462613 A0A1W2PQ45 241 aaPredicted RBP7.2□□□□□ -1.26
SF3B1-206ENST00000462613 A0A1W2PQY0 241 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 WDR64B1ANS9 1081 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 DDX39AO00148 427 aaKnown RBP7.2□□□□□ -1.26
SF3B1-206ENST00000462613 BACH1O14867 736 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 ADCY6O43306 1168 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 SORBS3O60504 671 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 TDP2O95551 362 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 PSAPP07602 524 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 ARP10275 920 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 MCM7P33993 719 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 TCF7P36402 384 aaPredicted RBP7.2□□□□□ -1.26
SF3B1-206ENST00000462613 SLC26A2P50443 739 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 JAK3P52333 1124 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 CHMP4BP1P59074 171 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 BEX3Q00994 111 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 FAM47CQ5HY64 1035 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 ZNF746Q6NUN9 644 aaPredicted RBP7.2□□□□□ -1.26
SF3B1-206ENST00000462613 MIER3Q7Z3K6 550 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 CKAP2LQ8IYA6 745 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 RDM1Q8NG50 284 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 ERMNQ8TAM6 284 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 CYP2W1Q8TAV3 490 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 TNFRSF25Q93038 417 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 FERMT2Q96AC1 680 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 SMARCAD1Q9H4L7 1026 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 ERAP1Q9NZ08 941 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 PRKAG2Q9UGJ0 569 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 PCDHA12Q9UN75 941 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 NOD1Q9Y239 953 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 PCDHA10Q9Y5I2 948 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 STK24Q9Y6E0 443 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 ARID2Q68CP9 1835 aa7.2□□□□□ -1.26
SF3B1-206ENST00000462613 CENPFP49454 3210 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms