RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ADD1P35611 737 aaKnown RBP21.7■■□□□ 1.06
COL5A1-203ENST00000460264 PBX2P40425 430 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 RBL2Q08999 1139 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 TIFAQ96CG3 184 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 GPRASP2Q96D09 838 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 CDX2Q99626 313 aaPredicted RBP21.7■■□□□ 1.06
COL5A1-203ENST00000460264 GPR20Q99678 358 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 PBX4Q9BYU1 374 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 RIC8AQ9NPQ8 531 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 BARHL2Q9NY43 387 aa21.7■■□□□ 1.06
COL5A1-203ENST00000460264 CCDC196A0A1B0GTZ2 297 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 H3BRB1 525 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 ADCY7P51828 1080 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 HIC1Q14526 733 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 AFAP1L1Q8TED9 768 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 CDHR1Q96JP9 859 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 TUT1Q9H6E5 874 aaKnown RBP21.69■■□□□ 1.06
COL5A1-203ENST00000460264 EHMT1Q9H9B1 1298 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 TELO2Q9Y4R8 837 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 UBIAD1Q9Y5Z9 338 aa21.69■■□□□ 1.06
COL5A1-203ENST00000460264 CDH23Q9H251 3354 aa21.68■■□□□ 1.06
COL5A1-203ENST00000460264 KCNA2P16389 499 aa21.68■■□□□ 1.06
COL5A1-203ENST00000460264 ZNF200P98182 395 aaPredicted RBP21.68■■□□□ 1.06
COL5A1-203ENST00000460264 GIMAP8Q8ND71 665 aaPredicted RBP21.68■■□□□ 1.06
COL5A1-203ENST00000460264 USP26Q9BXU7 913 aa21.68■■□□□ 1.06
COL5A1-203ENST00000460264 SLC4A7Q9Y6M7 1214 aa21.68■■□□□ 1.06
COL5A1-203ENST00000460264 PTPRSQ13332 1948 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 ZBBXA8MT70 800 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 ATP9AO75110 1047 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 SELPP16109 830 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 HOXC8P31273 242 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 SP4Q02446 784 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 PTK7Q13308 1070 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 MTMR1Q13613 665 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 PFKFB3Q16875 520 aaPredicted RBP21.67■■□□□ 1.06
COL5A1-203ENST00000460264 TRIM71Q2Q1W2 868 aaKnown RBP21.67■■□□□ 1.06
COL5A1-203ENST00000460264 LRRC8DQ7L1W4 858 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 TRIM50Q86XT4 487 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 WNT8BQ93098 351 aa21.67■■□□□ 1.06
COL5A1-203ENST00000460264 SMCO2A6NFE2 343 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 FOSP01100 380 aaPredicted RBP21.66■■□□□ 1.06
COL5A1-203ENST00000460264 SMIM10L2AP0DMW4 78 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 SMIM10L2BP0DMW5 78 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 CKBP12277 381 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 ACTN1P12814 892 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 SCG2P13521 617 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 RUFY3Q7L099 469 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 MYLIPQ8WY64 445 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 PGBD1Q96JS3 809 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 ANO3Q9BYT9 981 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 ZNF576Q9H609 170 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 ZSWIM6Q9HCJ5 1215 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 JADE2Q9NQC1 790 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 KAT6AQ92794 2004 aa21.66■■□□□ 1.06
COL5A1-203ENST00000460264 CLK2P49760 499 aaKnown RBP21.65■■□□□ 1.06
COL5A1-203ENST00000460264 EVCP57679 992 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 GPNMBQ14956 572 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 RAB30Q15771 203 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 SERINC5Q86VE9 423 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 FTOQ9C0B1 505 aaKnown RBP eCLIP21.65■■□□□ 1.06
COL5A1-203ENST00000460264 GLT8D2Q9H1C3 349 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 TMEM260Q9NX78 707 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 PKD2L1Q9P0L9 805 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 MSRAQ9UJ68 235 aa21.65■■□□□ 1.06
COL5A1-203ENST00000460264 ZNF215Q9UL58 517 aaPredicted RBP21.65■■□□□ 1.06
COL5A1-203ENST00000460264 C17orf102A2RUQ5 167 aa21.64■■□□□ 1.05
COL5A1-203ENST00000460264 ATP2A2P16615 1042 aaKnown RBP21.64■■□□□ 1.05
COL5A1-203ENST00000460264 AP3B2Q13367 1082 aa21.64■■□□□ 1.05
COL5A1-203ENST00000460264 TOB2Q14106 344 aaPredicted RBP21.64■■□□□ 1.05
COL5A1-203ENST00000460264 GRIN2CQ14957 1233 aa21.64■■□□□ 1.05
COL5A1-203ENST00000460264 PKN1Q16512 942 aa21.64■■□□□ 1.05
COL5A1-203ENST00000460264 TRAF7Q6Q0C0 670 aa21.64■■□□□ 1.05
COL5A1-203ENST00000460264 PHKBQ93100 1093 aa21.64■■□□□ 1.05
COL5A1-203ENST00000460264 YBX2Q9Y2T7 364 aaKnown RBP21.64■■□□□ 1.05
COL5A1-203ENST00000460264 MYO9BQ13459 2157 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 ESYT2A0FGR8 921 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 MAFGO15525 162 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 PRPF3O43395 683 aaKnown RBP21.63■■□□□ 1.05
COL5A1-203ENST00000460264 PARNO95453 639 aaKnown RBP21.63■■□□□ 1.05
COL5A1-203ENST00000460264 PDIA3P30101 505 aaKnown RBP21.63■■□□□ 1.05
COL5A1-203ENST00000460264 TCF7P36402 384 aaPredicted RBP21.63■■□□□ 1.05
COL5A1-203ENST00000460264 SREBF1P36956 1147 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 RABGGTBP53611 331 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 NTRK3Q16288 839 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 UTP14CQ5TAP6 766 aaKnown RBP21.63■■□□□ 1.05
COL5A1-203ENST00000460264 SLC17A8Q8NDX2 589 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 CYP2W1Q8TAV3 490 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 ATP6V0A1Q93050 837 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 MXRA8Q9BRK3 442 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 TM6SF1Q9BZW5 370 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 KCNH7Q9NS40 1196 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 CHD7Q9P2D1 2997 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 CYP46A1Q9Y6A2 500 aa21.63■■□□□ 1.05
COL5A1-203ENST00000460264 EYSQ5T1H1 3165 aa21.62■■□□□ 1.05
COL5A1-203ENST00000460264 NBNO60934 754 aa21.62■■□□□ 1.05
COL5A1-203ENST00000460264 CXCL10P02778 98 aa21.62■■□□□ 1.05
COL5A1-203ENST00000460264 ZNF618Q5T7W0 954 aa21.62■■□□□ 1.05
COL5A1-203ENST00000460264 UPF3BQ9BZI7 483 aaKnown RBP21.62■■□□□ 1.05
COL5A1-203ENST00000460264 ZMYND12Q9H0C1 365 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms