RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 HERVK_113Q902F9 699 aa20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 ZNF274Q96GC6 653 aaPredicted RBP20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 ZFP91Q96JP5 570 aaPredicted RBP20.05■□□□□ 0.8
SCARNA2-201ENST00000458748 TMEM265A0A087WTH1 108 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 HAS3O00219 553 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 ACRP10323 421 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 IFNAR1P17181 557 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 RFC2P35250 354 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 PSEN2P49810 448 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 MTMR1Q13613 665 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 MFSD10Q14728 455 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 PTGISQ16647 500 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 HSDL1Q3SXM5 330 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 CYFIP1Q7L576 1253 aa20.04■□□□□ 0.8
SCARNA2-201ENST00000458748 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 ANKRD1Q15327 319 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 KIAA0753Q2KHM9 967 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 CAGE1Q8TC20 777 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 ALG1Q9BT22 464 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 SLC26A6Q9BXS9 759 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 GTF2IRD1Q9UHL9 959 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 ZNF215Q9UL58 517 aaPredicted RBP20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 TANC1Q9C0D5 1861 aa20.03■□□□□ 0.8
SCARNA2-201ENST00000458748 SORBS3O60504 671 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 CDKL5O76039 1030 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 ZNF286BP0CG31 522 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 SEMA3FQ13275 785 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 GDF6Q6KF10 455 aaPredicted RBP20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 MYLIPQ8WY64 445 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 ANO3Q9BYT9 981 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 ZMYND12Q9H0C1 365 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 JADE2Q9NQC1 790 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 UBIAD1Q9Y5Z9 338 aa20.02■□□□□ 0.8
SCARNA2-201ENST00000458748 TRIP12Q14669 1992 aaPredicted RBP20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 DOCK5Q9H7D0 1870 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 H3BRB1 525 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 ZNF76P36508 570 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 SSRP1Q08945 709 aaKnown RBP20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 REXO1Q8N1G1 1221 aaKnown RBP20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 PPP1R13LQ8WUF5 828 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 PHKBQ93100 1093 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 SCLYQ96I15 445 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 C16orf70Q9BSU1 422 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 TUT1Q9H6E5 874 aaKnown RBP20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 SH3GLB2Q9NR46 395 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 HDAC6Q9UBN7 1215 aa20.01■□□□□ 0.79
SCARNA2-201ENST00000458748 PARNO95453 639 aaKnown RBP20■□□□□ 0.79
SCARNA2-201ENST00000458748 IQCF3P0C7M6 154 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 GNAT1P11488 350 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 ITGB5P18084 799 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 SREBF1P36956 1147 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 RBL2Q08999 1139 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 NTRK3Q16288 839 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 FAM177A1Q8N128 213 aaPredicted RBP20■□□□□ 0.79
SCARNA2-201ENST00000458748 AFAP1L1Q8TED9 768 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 GPR20Q99678 358 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 MXRA8Q9BRK3 442 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 SCN5AQ14524 2016 aa20■□□□□ 0.79
SCARNA2-201ENST00000458748 DEXIO95424 95 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 LGALS2P05162 132 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 DNAJB2P25686 324 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 CLK2P49760 499 aaKnown RBP19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 PTK7Q13308 1070 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 PKN1Q16512 942 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 CEP55Q53EZ4 464 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.99■□□□□ 0.79not detected■■■■□ 19.3
SCARNA2-201ENST00000458748 MAFAQ8NHW3 353 aaPredicted RBP19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 CTAGE1Q96RT6 745 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 SDF4Q9BRK5 362 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 NCOA5Q9HCD5 579 aaKnown RBP19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 CUL9Q8IWT3 2517 aa19.99■□□□□ 0.79
SCARNA2-201ENST00000458748 GRXCR1A8MXD5 290 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 ACTN1P12814 892 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 KCNA2P16389 499 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 ARHGAP4P98171 946 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 NIPA1Q7RTP0 329 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 OTOP2Q7RTS6 562 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 TNPO1Q92973 898 aaKnown RBP19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 VWCEQ96DN2 955 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 BCAS3Q9H6U6 928 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 KCNH7Q9NS40 1196 aa19.98■□□□□ 0.79
SCARNA2-201ENST00000458748 C17orf102A2RUQ5 167 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 FOSL2P15408 326 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 SELPP16109 830 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 SP4Q02446 784 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 STK3Q13188 491 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 GRIN2CQ14957 1233 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 JAKMIP3Q5VZ66 844 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 SEPT1Q8WYJ6 367 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 C22orf23Q9BZE7 217 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 JPH1Q9HDC5 661 aaPredicted RBP19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 TMEM260Q9NX78 707 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 CXXC1Q9P0U4 656 aaPredicted RBP19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 SLC4A7Q9Y6M7 1214 aa19.97■□□□□ 0.79
SCARNA2-201ENST00000458748 A0A0C4DFX4 3053 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms