RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 HLTFQ14527 1009 aaKnown RBP eCLIP21.58■■□□□ 1.04
CNEP1R1-203ENST00000458059 CFAP221Q4G0U5 840 aa21.58■■□□□ 1.04
CNEP1R1-203ENST00000458059 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.04
CNEP1R1-203ENST00000458059 ZNF287Q9HBT7 754 aa21.58■■□□□ 1.04
CNEP1R1-203ENST00000458059 RTCBQ9Y3I0 505 aaKnown RBP21.58■■□□□ 1.04
CNEP1R1-203ENST00000458059 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.58■■□□□ 1.04
CNEP1R1-203ENST00000458059 NOP2P46087 812 aaKnown RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 GUCY1A3Q02108 690 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 SLC20A2Q08357 652 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 STK17AQ9UEE5 414 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 C6orf229H3BNL8 230 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 KLHL30Q0D2K2 578 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 NNTQ13423 1086 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 SHROOM1Q2M3G4 852 aaPredicted RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 DDX42Q86XP3 938 aaKnown RBP eCLIP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 RAB34Q9BZG1 259 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 PCDHA12Q9UN75 941 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 COL22A1Q8NFW1 1626 aaPredicted RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 COL14A1Q05707 1796 aaKnown RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 PVALEFA0A1B0GWK0 134 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 USP17L10C9JJH3 530 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 FGFR1OPO95684 399 aaKnown RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 HPDP32754 393 aaPredicted RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 FKBP3Q00688 224 aaKnown RBP21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 LRRC63Q05C16 580 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 PPFIA1Q13136 1202 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 HAS1Q92839 578 aa21.57■■□□□ 1.04
CNEP1R1-203ENST00000458059 IRS2Q9Y4H2 1338 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 LAMB2P55268 1798 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 EBAG9O00559 213 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 ASTE1Q2TB18 679 aaPredicted RBP21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 CFAP58Q5T655 872 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 GPBP1Q86WP2 473 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 OR2W6PQ8NHA6 318 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 AP1M1Q9BXS5 423 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 FAM169AQ9Y6X4 670 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 KCNK3O14649 394 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 RFC4P35249 363 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 PPP4CP60510 307 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 SLC30A10Q6XR72 485 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 MAATS1Q7Z4T9 603 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 ADGRF4Q8IZF3 695 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 DNAJC19Q96DA6 116 aa21.56■■□□□ 1.04
CNEP1R1-203ENST00000458059 GRAPQ13588 217 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 DCAF17Q5H9S7 520 aaPredicted RBP21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 TCERG1LQ5VWI1 586 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 GRAPLQ8TC17 118 aaPredicted RBP21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 GRIN2DO15399 1336 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 POTEFA5A3E0 1075 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 POTEIP0CG38 1075 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 FXR2P51116 673 aaKnown RBP eCLIP21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 SCNN1DP51172 638 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 CASP5P51878 434 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 GTF2IP78347 998 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 POTEGQ6S5H5 508 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 POTEEQ6S8J3 1075 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 JMJD4Q9H9V9 463 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 ROBO3Q96MS0 1386 aa21.55■■□□□ 1.04
CNEP1R1-203ENST00000458059 NDUFAB1O14561 156 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 SLC9A1P19634 815 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 PPP1R2P41236 205 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 RHBDL3P58872 404 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 CASKIN2Q8WXE0 1202 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 RPGRQ92834 1020 aaKnown RBP21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 IKZF4Q9H2S9 585 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 SPATA31A5Q5VU36 1347 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 SPATA31A7Q8IWB4 1347 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 SHTN1A0MZ66 631 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 OPA1O60313 960 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 ADAM9Q13443 819 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 MTMR4Q9NYA4 1195 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 EIF3HO15372 352 aaKnown RBP eCLIP21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 RIOX1Q9H6W3 641 aa21.54■■□□□ 1.04
CNEP1R1-203ENST00000458059 ZNF233A6NK53 670 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 BACH1O14867 736 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 RAD51CO43502 376 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 SEC24CP53992 1094 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 SF3A3Q12874 501 aaKnown RBP eCLIP21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 FBXW10Q5XX13 1052 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 IFT20Q8IY31 132 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 RNPC3Q96LT9 517 aaKnown RBP21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 BMP2KQ9NSY1 1161 aaPredicted RBP21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 ATP6V0A2Q9Y487 856 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 TMCO5BA8MYB1 307 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 LCA5LO95447 670 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 SERPING1P05155 500 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 PLA2G4BP0C869 781 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 CEP72Q9P209 647 aa21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 BCCIPQ9P287 314 aaKnown RBP eCLIP21.53■■□□□ 1.04
CNEP1R1-203ENST00000458059 GPR75-ASB3A0A0A6YYF3 556 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 GOLGA8KD6RF30 607 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 CEP104O60308 925 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 PABPC4Q13310 644 aaKnown RBP eCLIP21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 EMBQ6PCB8 327 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 GJB7Q6PEY0 223 aa21.52■■□□□ 1.04
CNEP1R1-203ENST00000458059 PPM1EQ8WY54 764 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms