RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SPDYE3A6NKU9 549 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 H3BRB1 525 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 STXBP3O00186 592 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 LGALS2P05162 132 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 ITGB5P18084 799 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 PSMA5P28066 241 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 ADD1P35611 737 aaKnown RBP22.25■■□□□ 1.15
USP40-207ENST00000450940 PBX2P40425 430 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 FGD1P98174 961 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 APOBRQ0VD83 1088 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 PTK7Q13308 1070 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 BRF1Q92994 677 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 TIFAQ96CG3 184 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 CDHR1Q96JP9 859 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 TUT1Q9H6E5 874 aaKnown RBP22.25■■□□□ 1.15
USP40-207ENST00000450940 PPP4R2Q9NY27 417 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 BARHL2Q9NY43 387 aa22.25■■□□□ 1.15
USP40-207ENST00000450940 NOP56O00567 594 aaKnown RBP22.24■■□□□ 1.15
USP40-207ENST00000450940 MAFGO15525 162 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 PARNO95453 639 aaKnown RBP22.24■■□□□ 1.15
USP40-207ENST00000450940 SELPP16109 830 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 NAPAP54920 295 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 EVCP57679 992 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 HIC1Q14526 733 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 GPNMBQ14956 572 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 TRIM71Q2Q1W2 868 aaKnown RBP22.24■■□□□ 1.15
USP40-207ENST00000450940 DEFB128Q7Z7B8 93 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 ZNF576Q9H609 170 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 SLC4A7Q9Y6M7 1214 aa22.24■■□□□ 1.15
USP40-207ENST00000450940 ATP9AO75110 1047 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 FOSP01100 380 aaPredicted RBP22.23■■□□□ 1.15
USP40-207ENST00000450940 CKBP12277 381 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 ACTN1P12814 892 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 KCNA2P16389 499 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 METAP2P50579 478 aaKnown RBP eCLIP22.23■■□□□ 1.15
USP40-207ENST00000450940 RAB30Q15771 203 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 GLT8D2Q9H1C3 349 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 EHMT1Q9H9B1 1298 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 JADE2Q9NQC1 790 aa22.23■■□□□ 1.15
USP40-207ENST00000450940 CLK2P49760 499 aaKnown RBP22.22■■□□□ 1.15
USP40-207ENST00000450940 ADCY7P51828 1080 aa22.22■■□□□ 1.15
USP40-207ENST00000450940 ZNF200P98182 395 aaPredicted RBP22.22■■□□□ 1.15
USP40-207ENST00000450940 PFKFB3Q16875 520 aaPredicted RBP22.22■■□□□ 1.15
USP40-207ENST00000450940 TRAF7Q6Q0C0 670 aa22.22■■□□□ 1.15
USP40-207ENST00000450940 LRRC8DQ7L1W4 858 aa22.22■■□□□ 1.15
USP40-207ENST00000450940 SERINC5Q86VE9 423 aa22.22■■□□□ 1.15
USP40-207ENST00000450940 SLC17A8Q8NDX2 589 aa22.22■■□□□ 1.15
USP40-207ENST00000450940 TELO2Q9Y4R8 837 aa22.22■■□□□ 1.15
USP40-207ENST00000450940 SMCO2A6NFE2 343 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 CXCL10P02778 98 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 MTMR1Q13613 665 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 GRIN2CQ14957 1233 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 MYLIPQ8WY64 445 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 WNT8BQ93098 351 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 ZSWIM6Q9HCJ5 1215 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 MSRAQ9UJ68 235 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 KAT6AQ92794 2004 aa22.21■■□□□ 1.15
USP40-207ENST00000450940 PRPF3O43395 683 aaKnown RBP22.2■■□□□ 1.14
USP40-207ENST00000450940 SMIM10L2AP0DMW4 78 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 SMIM10L2BP0DMW5 78 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 SCG2P13521 617 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 NTRK3Q16288 839 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 RUFY3Q7L099 469 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 PHOSPHO2Q8TCD6 241 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 MXRA8Q9BRK3 442 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 TM6SF1Q9BZW5 370 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 RNPEPQ9H4A4 650 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 NAP1L2Q9ULW6 460 aaPredicted RBP22.2■■□□□ 1.14
USP40-207ENST00000450940 PCDHA11Q9Y5I1 949 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 MYO9BQ13459 2157 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 CDH23Q9H251 3354 aa22.2■■□□□ 1.14
USP40-207ENST00000450940 ESYT2A0FGR8 921 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 C17orf102A2RUQ5 167 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 ZBBXA8MT70 800 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 BAIAP3O94812 1187 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 ATP2A2P16615 1042 aaKnown RBP22.19■■□□□ 1.14
USP40-207ENST00000450940 AP3B2Q13367 1082 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 PKN1Q16512 942 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 ANO3Q9BYT9 981 aa22.19■■□□□ 1.14
USP40-207ENST00000450940 FTOQ9C0B1 505 aaKnown RBP eCLIP22.19■■□□□ 1.14
USP40-207ENST00000450940 YBX2Q9Y2T7 364 aaKnown RBP22.19■■□□□ 1.14
USP40-207ENST00000450940 PTPRSQ13332 1948 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 GSTTP1A0A1W2PQM5 241 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 NBNO60934 754 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 PDIA3P30101 505 aaKnown RBP22.18■■□□□ 1.14
USP40-207ENST00000450940 SREBF1P36956 1147 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 ADAM17P78536 824 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 ZNF618Q5T7W0 954 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 SEPT1Q8WYJ6 367 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 ATP6V0A1Q93050 837 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 SLC9A7Q96T83 725 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 ZMYND12Q9H0C1 365 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 KCNH7Q9NS40 1196 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 ZNF215Q9UL58 517 aaPredicted RBP22.18■■□□□ 1.14
USP40-207ENST00000450940 CHD7Q9P2D1 2997 aa22.18■■□□□ 1.14
USP40-207ENST00000450940 A0A0C4DFX4 3053 aa22.17■■□□□ 1.14
USP40-207ENST00000450940 IFNAR1P17181 557 aa22.17■■□□□ 1.14
USP40-207ENST00000450940 TCF7P36402 384 aaPredicted RBP22.17■■□□□ 1.14
USP40-207ENST00000450940 TOB2Q14106 344 aaPredicted RBP22.17■■□□□ 1.14
USP40-207ENST00000450940 CEP55Q53EZ4 464 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms