RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FMNL2Q96PY5 1086 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 OSBPL9Q96SU4 736 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 WNT10AQ9GZT5 417 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 RETREG1Q9H6L5 497 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CAAP1Q9H8G2 361 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 NCOA5Q9HCD5 579 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 PRDM6Q9NQX0 595 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 PDRG1Q9NUG6 133 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ARGLU1Q9NWB6 273 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 RGL1Q9NZL6 768 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 KLHL3Q9UH77 587 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF510Q9Y2H8 683 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 FRMD4BQ9Y2L6 1034 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 SH3TC1Q8TE82 1336 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 NPATQ14207 1427 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CASKIN1Q8WXD9 1431 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC141Q6ZP82 1450 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 UGGT2Q9NYU1 1516 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZC3H13Q5T200 1668 aaKnown RBP4.09□□□□□ -1.76
HMGB3P8-201ENST00000449709 PBRM1Q86U86 1689 aa4.09□□□□□ -1.76
HMGB3P8-201ENST00000449709 A0A1W2PQU0 124 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 ERICH2A1L162 156 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 PRAMEF27A3QJZ7 478 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM86C2PA6NEL3 165 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMEM221A6NGB7 291 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 EFCAB8A8MWE9 144 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 H3BQF6 201 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 IRS4O14654 1257 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 FSCN2O14926 492 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 ABCC3O15438 1527 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 PDE8AO60658 829 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 VCAM1P19320 739 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 POLR2BP30876 1174 aaKnown RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 L1CAMP32004 1257 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 GRK4P32298 578 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 NF2P35240 595 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SOX5P35711 763 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCNFP41002 786 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZNF143P52747 638 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 INHBCP55103 352 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 HMGXB3Q12766 1538 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRIM28Q13263 835 aaKnown RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SHPRHQ149N8 1683 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLMAPQ14BN4 828 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 POSTNQ15063 836 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 PABPC1LQ4VXU2 614 aaKnown RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 BRDTQ58F21 947 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 BMP2KLQ5H9B9 411 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 IQSEC2Q5JU85 1478 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRAPPC3LQ5T215 181 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC183Q5T5S1 534 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 NUTM2GQ5VZR2 741 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZSCAN25Q6NSZ9 544 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM117BQ6P1L5 589 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TTC41PQ6P2S7 1318 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TXNDC11Q6PKC3 985 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SARM1Q6SZW1 724 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMCO3Q6UWJ1 677 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 DNMBPQ6XZF7 1577 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 PHLPP2Q6ZVD8 1323 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SUPT6HQ7KZ85 1726 aaKnown RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 GET4Q7L5D6 327 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 CASZ1Q86V15 1759 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 IQCA1Q86XH1 822 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 MCATQ8IVS2 390 aaKnown RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 NUDT8Q8WV74 236 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 HOOK2Q96ED9 719 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SAAL1Q96ER3 474 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 DTNBP1Q96EV8 351 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 BICD1Q96G01 975 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 CLUHP3Q96NS8 147 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 DHRS4Q9BTZ2 278 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 RNF17Q9BXT8 1623 aaKnown RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 USP26Q9BXU7 913 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 RWDD1Q9H446 243 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 MYO5CQ9NQX4 1742 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 ARHGEF4Q9NR80 690 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMOD4Q9NZQ9 345 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 TJP2Q9UDY2 1190 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 SUSD2Q9UGT4 822 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 GGA2Q9UJY4 613 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 ODF2LQ9ULJ1 636 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 WDR37Q9Y2I8 494 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 PCDHGC5Q9Y5F6 944 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 GMEB1Q9Y692 573 aa4.08□□□□□ -1.76
HMGB3P8-201ENST00000449709 EIF4G3O43432 1585 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 FANCAO15360 1455 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MED14O60244 1454 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SSH2Q76I76 1423 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SYNGAP1Q96PV0 1343 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC151A5D8V7 595 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 GSG1L2A8MUP6 293 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 AGRPO00253 132 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 ABLIM1O14639 778 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 DYRK3O43781 588 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MGRN1O60291 552 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZEB2O60315 1214 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 E2F6O75461 281 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms