RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PCDHA7Q9UN72 937 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 TRIM17Q9Y577 477 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 GOLGA6L4A6NEF3 574 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 MARCKSP29966 332 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 SFNP31947 248 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 CYP2C19P33261 490 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 SPIRE1Q08AE8 756 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 AXDND1Q5T1B0 1012 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 ZNF746Q6NUN9 644 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-202ENST00000439369 VAV3Q9UKW4 847 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 FAM184BQ9ULE4 1060 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 Q9Y3F1 56 aa14.3□□□□□ -0.12
SCLT1-202ENST00000439369 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 ZNF865P0CJ78 1059 aaPredicted RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 TXNP10599 105 aaKnown RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 CYBAP13498 195 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 UBA1P22314 1058 aaKnown RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 CMA1P23946 247 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 MCM4P33991 863 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 JAK3P52333 1124 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 UBE2HP62256 183 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 IL17AQ16552 155 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 DUSP28Q4G0W2 176 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 MAP3K21Q5TCX8 1036 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 METTL7BQ6UX53 244 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 EEPD1Q7L9B9 569 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 CTU1Q7Z7A3 348 aaKnown RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 SMAP1Q8IYB5 467 aaPredicted RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 KCTD17Q8N5Z5 321 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 ERMNQ8TAM6 284 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 JPH1Q9HDC5 661 aaPredicted RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 LRWD1Q9UFC0 647 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 PTPN22Q9Y2R2 807 aa14.29□□□□□ -0.12
SCLT1-202ENST00000439369 DDX49Q9Y6V7 483 aaKnown RBP14.29□□□□□ -0.12
SCLT1-202ENST00000439369 FAM237AA0A1B0GTK4 181 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 WDR64B1ANS9 1081 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 ATP9AO75110 1047 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 GH1P01241 217 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 AKR1A1P14550 325 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 MUTP22033 750 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 GRK4P32298 578 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 TXLNAP40222 546 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 TECP42680 631 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 TCHHQ07283 1943 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 LAMC2Q13753 1193 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 CCDC144BQ3MJ40 725 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
SCLT1-202ENST00000439369 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
SCLT1-202ENST00000439369 CCSER1Q9C0I3 900 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 CSRNP2Q9H175 543 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
SCLT1-202ENST00000439369 MCM3APO60318 1980 aa14.27□□□□□ -0.12
SCLT1-202ENST00000439369 SEPT4O43236 478 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 PRPF40AO75400 957 aaKnown RBP14.27□□□□□ -0.13
SCLT1-202ENST00000439369 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.13
SCLT1-202ENST00000439369 ARIH2O95376 493 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 GGPS1O95749 300 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 ELNP15502 786 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 ADCYAP1R1P41586 468 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 SP2Q02086 613 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 CACNB2Q08289 660 aaPredicted RBP14.27□□□□□ -0.13
SCLT1-202ENST00000439369 EPHA7Q15375 998 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 RESP18Q5W5W9 173 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 HAUS3Q68CZ6 603 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 DHX37Q8IY37 1157 aaKnown RBP14.27□□□□□ -0.13
SCLT1-202ENST00000439369 UNC45AQ9H3U1 944 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 PDGFCQ9NRA1 345 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 FAM13BQ9NYF5 915 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 PTCH2Q9Y6C5 1203 aa14.27□□□□□ -0.13
SCLT1-202ENST00000439369 KDM3AQ9Y4C1 1321 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 MSCO60682 206 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 DKC1O60832 514 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCLT1-202ENST00000439369 DUSP11O75319 330 aaKnown RBP14.26□□□□□ -0.13
SCLT1-202ENST00000439369 ATG7O95352 703 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
SCLT1-202ENST00000439369 UBA7P41226 1012 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 LBX1P52954 281 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 NKX3-2P78367 333 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 ARHGAP1Q07960 439 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 LY6KQ17RY6 165 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 KRT79Q5XKE5 535 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 CYFIP1Q7L576 1253 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 MRPS27Q92552 414 aaKnown RBP14.26□□□□□ -0.13
SCLT1-202ENST00000439369 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 POLR3CQ9BUI4 534 aaPredicted RBP14.26□□□□□ -0.13
SCLT1-202ENST00000439369 MLXIPQ9HAP2 919 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 TUFT1Q9NNX1 390 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 PRDM10Q9NQV6 1147 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 PKD2L1Q9P0L9 805 aa14.26□□□□□ -0.13
SCLT1-202ENST00000439369 GNEQ9Y223 722 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 260.8 ms