RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 MYOTQ9UBF9 498 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
HMGB3P5-201ENST00000428894 ABCC8Q09428 1581 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 RSF1Q96T23 1441 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 PDPK1O15530 556 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 MAFKO60675 156 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 CELA3BP08861 270 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 SKOR2Q2VWA4 1001 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 ZFYVE27Q5T4F4 411 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 LBX2Q6XYB7 198 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 PIP4K2CQ8TBX8 421 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 PHOSPHO1Q8TCT1 267 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 SLC6A20Q9NP91 592 aa7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 ZNF608Q9ULD9 1512 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P5-201ENST00000428894 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 CCDC85CA6NKD9 419 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 SLC27A2O14975 620 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 LRG1P02750 347 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 GTF2F1P35269 517 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 ADAM9Q13443 819 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 TEPPQ6URK8 271 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 IFNL3Q8IZI9 196 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 KCNJ15Q99712 375 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 ZFYVE21Q9BQ24 234 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 BDH2Q9BUT1 245 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 CCDC113Q9H0I3 377 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 ASH2LQ9UBL3 628 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 DUSP10Q9Y6W6 482 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 ARAP1Q96P48 1450 aa7.55□□□□□ -1.2
HMGB3P5-201ENST00000428894 DDX3XO00571 662 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 COL6A2P12110 1019 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 GRK2P25098 689 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 CNR2P34972 360 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 GRK3P35626 688 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 GPR85P60893 370 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 PLP2Q04941 152 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 RASGRF1Q13972 1273 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 KIZQ2M2Z5 673 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 RGL3Q3MIN7 710 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 MTERF2Q49AM1 385 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 PRR31Q5SQ13 230 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 MCTP2Q6DN12 878 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 STYK1Q6J9G0 422 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 C8orf37Q96NL8 207 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
HMGB3P5-201ENST00000428894 GRIN1Q05586 938 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 OTOP3Q7RTS5 596 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 TRIM48Q8IWZ4 208 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 RBM12BQ8IXT5 1001 aaKnown RBP7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 ZSWIM3Q96MP5 696 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 CDC6Q99741 560 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 SIRPGQ9P1W8 387 aa7.53□□□□□ -1.2
HMGB3P5-201ENST00000428894 GNAT1P11488 350 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 SSRP1Q08945 709 aaKnown RBP7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 SPIRE1Q08AE8 756 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 FAM26FQ5R3K3 315 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 PRAMEF18Q5VWM3 479 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 CLEC4DQ8WXI8 215 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 CLIC6Q96NY7 704 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 CHD1O14646 1710 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 ASXL2Q76L83 1435 aa7.52□□□□□ -1.21
HMGB3P5-201ENST00000428894 ADCY3O60266 1144 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 SOD2P04179 222 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 KIAA2012Q0VF49 1180 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 TMC5Q6UXY8 1006 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 IPO9Q96P70 1041 aaKnown RBP7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 CROTQ9UKG9 612 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 WASF3Q9UPY6 502 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 TRAF6Q9Y4K3 522 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 TOPBP1Q92547 1522 aa7.51□□□□□ -1.21
HMGB3P5-201ENST00000428894 EIF4G3O43432 1585 aaKnown RBP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 TRBV23-1A0A0A0MS06 115 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 MROH6A6NGR9 719 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 FAM47E-STBD1D6RA91 191 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 NKRFO15226 690 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 TUSC3Q13454 348 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 FAM209AQ5JX71 171 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 FOXB2Q5VYV0 432 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 PRRT2Q7Z6L0 340 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 ZBTB38Q8NAP3 1195 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 TTLL11Q8NHH1 800 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 UHMK1Q8TAS1 419 aaKnown RBP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 TMEM209Q96SK2 561 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 ALG1Q9BT22 464 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 IPPKQ9H8X2 491 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 RBPJLQ9UBG7 517 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 NUB1Q9Y5A7 615 aa7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 TOP2AP11388 1531 aaKnown RBP7.5□□□□□ -1.21
HMGB3P5-201ENST00000428894 LTFP02788 710 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms