RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 GUCY1B3Q02153 619 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 ITGB3BPQ13352 177 aaPredicted RBP25.45■■□□□ 1.66
PTCD3-203ENST00000409783 INF2Q27J81 1249 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 DIS3L2Q8IYB7 885 aaKnown RBP25.45■■□□□ 1.66
PTCD3-203ENST00000409783 GIMAP8Q8ND71 665 aaPredicted RBP25.45■■□□□ 1.66
PTCD3-203ENST00000409783 FBXO18Q8NFZ0 1043 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 DPF3Q92784 378 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 MTG1Q9BT17 334 aaPredicted RBP25.45■■□□□ 1.66
PTCD3-203ENST00000409783 PKD2L1Q9P0L9 805 aa25.45■■□□□ 1.66
PTCD3-203ENST00000409783 A0A0U1RQG5 324 aaPredicted RBP25.44■■□□□ 1.66
PTCD3-203ENST00000409783 PSMC6P62333 389 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 TRIM29Q14134 588 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 DGKDQ16760 1214 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 TRIM60Q495X7 471 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 FAM184AQ8NB25 1140 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 KAT2BQ92831 832 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 SNX21Q969T3 373 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 MBOAT7Q96N66 472 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 GPR20Q99678 358 aa25.44■■□□□ 1.66
PTCD3-203ENST00000409783 NFASCO94856 1347 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 CYP3A7-CYP3A51PA0A087WV96 503 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 CCDC194A0A1B0GVG4 234 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 EVI5O60447 810 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 PPFIA4O75335 1185 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 CYP3A7P24462 503 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 PIK3AP1Q6ZUJ8 805 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 BRMS1Q9HCU9 246 aa25.43■■□□□ 1.66
PTCD3-203ENST00000409783 ARVCFO00192 962 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 DHX15O43143 795 aaKnown RBP25.42■■□□□ 1.66
PTCD3-203ENST00000409783 TDP2O95551 362 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 GJB2P29033 226 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 SETQ01105 290 aaPredicted RBP25.42■■□□□ 1.66
PTCD3-203ENST00000409783 ITGA7Q13683 1181 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 PRR16Q569H4 304 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 MOXD1Q6UVY6 613 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 VTI1AQ96AJ9 217 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 ATP11BQ9Y2G3 1177 aa25.42■■□□□ 1.66
PTCD3-203ENST00000409783 TLE2Q04725 743 aa25.41■■□□□ 1.66
PTCD3-203ENST00000409783 Q4G0T1 1027 aa25.41■■□□□ 1.66
PTCD3-203ENST00000409783 ANKRD33Q7Z3H0 272 aa25.41■■□□□ 1.66
PTCD3-203ENST00000409783 C7orf61Q8IZ16 206 aa25.41■■□□□ 1.66
PTCD3-203ENST00000409783 C16orf70Q9BSU1 422 aa25.41■■□□□ 1.66
PTCD3-203ENST00000409783 GSTTP1A0A1W2PQM5 241 aa25.4■■□□□ 1.66
PTCD3-203ENST00000409783 K7ELQ4 463 aaPredicted RBP25.4■■□□□ 1.66
PTCD3-203ENST00000409783 F2P00734 622 aa25.4■■□□□ 1.66
PTCD3-203ENST00000409783 ZNF286BP0CG31 522 aa25.4■■□□□ 1.66
PTCD3-203ENST00000409783 NEK8Q86SG6 692 aa25.4■■□□□ 1.66
PTCD3-203ENST00000409783 TOX2Q96NM4 488 aa25.4■■□□□ 1.66
PTCD3-203ENST00000409783 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.4■■□□□ 1.66
PTCD3-203ENST00000409783 HAS3O00219 553 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 IPO5O00410 1097 aaKnown RBP25.39■■□□□ 1.66
PTCD3-203ENST00000409783 NOP56O00567 594 aaKnown RBP25.39■■□□□ 1.66
PTCD3-203ENST00000409783 MSH4O15457 936 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 SP4Q02446 784 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 NBPF20Q3BBV1 942 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 UIMC1Q96RL1 719 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 JPH1Q9HDC5 661 aaPredicted RBP25.39■■□□□ 1.66
PTCD3-203ENST00000409783 SLC9A2Q9UBY0 812 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 SMC3Q9UQE7 1217 aa25.39■■□□□ 1.66
PTCD3-203ENST00000409783 CEP290O15078 2479 aa25.39■■□□□ 1.65
PTCD3-203ENST00000409783 LGALS2P05162 132 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 LETM2Q2VYF4 491 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 PPP4R3AQ6IN85 833 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 FAM126BQ8IXS8 530 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 PPP1R13LQ8WUF5 828 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 SDF4Q9BRK5 362 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 ZNF577Q9BSK1 485 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 SEZ6LQ9BYH1 1024 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 FOXP1Q9H334 677 aaPredicted RBP25.38■■□□□ 1.65
PTCD3-203ENST00000409783 KIF3AQ9Y496 699 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 NR2E3Q9Y5X4 410 aa25.38■■□□□ 1.65
PTCD3-203ENST00000409783 KIF28PB7ZC32 967 aa25.37■■□□□ 1.65
PTCD3-203ENST00000409783 SLC37A4O43826 429 aa25.37■■□□□ 1.65
PTCD3-203ENST00000409783 PQBP1O60828 265 aaKnown RBP25.37■■□□□ 1.65
PTCD3-203ENST00000409783 CCNE2O96020 404 aa25.37■■□□□ 1.65
PTCD3-203ENST00000409783 PSEN2P49810 448 aa25.37■■□□□ 1.65
PTCD3-203ENST00000409783 SAFBQ15424 915 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTCD3-203ENST00000409783 SEPT1Q8WYJ6 367 aa25.37■■□□□ 1.65
PTCD3-203ENST00000409783 SLC5A5Q92911 643 aa25.37■■□□□ 1.65
PTCD3-203ENST00000409783 H0YGN5 161 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 WNT7AO00755 349 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 ATG7O95352 703 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 CD4P01730 458 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 TCF7P36402 384 aaPredicted RBP25.36■■□□□ 1.65
PTCD3-203ENST00000409783 FAAP100Q0VG06 881 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 NFRKBQ6P4R8 1299 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 ETNPPLQ8TBG4 499 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 PCYT2Q99447 389 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 PDLIM7Q9NR12 457 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 TBC1D22BQ9NU19 505 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 DDX25Q9UHL0 483 aaKnown RBP25.36■■□□□ 1.65
PTCD3-203ENST00000409783 MROH7Q68CQ1 1323 aa25.36■■□□□ 1.65
PTCD3-203ENST00000409783 WDR81Q562E7 1941 aa25.35■■□□□ 1.65
PTCD3-203ENST00000409783 GCFC2P16383 781 aaKnown RBP25.35■■□□□ 1.65
PTCD3-203ENST00000409783 U2AF2P26368 475 aaKnown RBP eCLIP25.35■■□□□ 1.651e-7■□□□□ 8
PTCD3-203ENST00000409783 ACTR2P61160 394 aa25.35■■□□□ 1.65
PTCD3-203ENST00000409783 MFSD10Q14728 455 aa25.35■■□□□ 1.65
PTCD3-203ENST00000409783 SH3RF1Q7Z6J0 888 aa25.35■■□□□ 1.65
PTCD3-203ENST00000409783 TRIM50Q86XT4 487 aa25.35■■□□□ 1.65
PTCD3-203ENST00000409783 INTS4Q96HW7 963 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms