RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 MMEP08473 750 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 ODR4Q5SWX8 454 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 BSPRYQ5W0U4 402 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 HDAC11Q96DB2 347 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 NACA2Q9H009 215 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 FAM133BQ5BKY9 247 aaKnown RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 BBS5Q8N3I7 341 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 ACRBPQ8NEB7 543 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 CXorf38Q8TB03 319 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 AMNQ9BXJ7 453 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 KRT37O76014 449 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 MX2P20592 715 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 XKR9Q5GH70 373 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 APLFQ8IW19 511 aaPredicted RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 PITPNM3Q9BZ71 974 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 CEP72Q9P209 647 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 TADA3O75528 432 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 PDE8BO95263 885 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 RFX1P22670 979 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 TFDP1Q14186 410 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 NBPF20Q3BBV1 942 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 ARHGEF16Q5VV41 709 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 CATSPER1Q8NEC5 780 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 TRIM33Q9UPN9 1127 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNX1-202ENST00000380285 FAM160B1Q5W0V3 765 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 PLEKHA4Q9H4M7 779 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 PLAAQ9Y263 795 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 IVNS1ABPQ9Y6Y0 642 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 MOCS3O95396 460 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 RWDD2BP57060 319 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 DPP8Q6V1X1 898 aaPredicted RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 SYT2Q8N9I0 419 aaPredicted RBP10.34□□□□□ -0.75
SNX1-202ENST00000380285 TTC1Q99614 292 aa10.34□□□□□ -0.75
SNX1-202ENST00000380285 ATP2B4P23634 1241 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 TTC13Q8NBP0 860 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 PAGE5Q96GU1 130 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 ZNF496Q96IT1 587 aaPredicted RBP10.33□□□□□ -0.76
SNX1-202ENST00000380285 TLK1Q9UKI8 766 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 LGALS16A8MUM7 142 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 TJP3O95049 919 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 KRT31Q15323 416 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 TTBK2Q6IQ55 1244 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 RFX6Q8HWS3 928 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 WDR75Q8IWA0 830 aaKnown RBP10.33□□□□□ -0.76
SNX1-202ENST00000380285 NRBP2Q9NSY0 501 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 PCDHB4Q9Y5E5 795 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 EEF1DP29692 281 aaKnown RBP10.33□□□□□ -0.76
SNX1-202ENST00000380285 POLE2P56282 527 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 AP2B1P63010 937 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 PPP2R2AP63151 447 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 SCYL2Q6P3W7 929 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 STAMBPL1Q96FJ0 436 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 ERVK-7P63135 1459 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 CA8P35219 290 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 NECTIN1Q15223 517 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 KLC3Q6P597 504 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 RAPH1Q70E73 1250 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 AK9Q5TCS8 1911 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 PPP1R12AO14974 1030 aaPredicted RBP10.33□□□□□ -0.76
SNX1-202ENST00000380285 TMOD1P28289 359 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 KAZNQ674X7 775 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 CDHR1Q96JP9 859 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 F8W8V4 182 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 ADAT2Q7Z6V5 191 aaKnown RBP10.33□□□□□ -0.76
SNX1-202ENST00000380285 SLITRK6Q9H5Y7 841 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 SENP1Q9P0U3 644 aa10.33□□□□□ -0.76
SNX1-202ENST00000380285 GYG2O15488 501 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PTPREP23469 700 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 ANXA13P27216 316 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 ADD2P35612 726 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 IGBP1P78318 339 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 KLHL38Q2WGJ6 581 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 GIPC2Q8TF65 315 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 DHX38Q92620 1227 aaKnown RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 SH3GL3Q99963 347 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 TTLL3Q9Y4R7 772 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 FRMD3A2A2Y4 597 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 ARMC2Q8NEN0 867 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 RBM41Q96IZ5 413 aaKnown RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 DISC1Q9NRI5 854 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 DBNLQ9UJU6 430 aaKnown RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 FAM187AA6NFU0 413 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 GNGT2O14610 69 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 EDEM3Q9BZQ6 932 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 MRGBPQ9NV56 204 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 USP40Q9NVE5 1235 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms