RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 AGO4Q9HCK5 861 aaKnown RBP22.74■■□□□ 1.23
RER1-204ENST00000378518 IGLV3-22A0A075B6J6 115 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 H3BQV1 296 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 ATP9AO75110 1047 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 ARP10275 920 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 LETM2Q2VYF4 491 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 CXCL17Q6UXB2 119 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 TNFRSF25Q93038 417 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 MTG1Q9BT17 334 aaPredicted RBP22.73■■□□□ 1.23
RER1-204ENST00000378518 FOXP1Q9H334 677 aaPredicted RBP22.73■■□□□ 1.23
RER1-204ENST00000378518 NFASCO94856 1347 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 ELP1O95163 1332 aa22.73■■□□□ 1.23
RER1-204ENST00000378518 GCFC2P16383 781 aaKnown RBP22.72■■□□□ 1.23
RER1-204ENST00000378518 ATN1P54259 1190 aaPredicted RBP22.72■■□□□ 1.23
RER1-204ENST00000378518 PURAQ00577 322 aaKnown RBP22.72■■□□□ 1.23
RER1-204ENST00000378518 SLC39A5Q6ZMH5 540 aa22.72■■□□□ 1.23
RER1-204ENST00000378518 ZNF577Q9BSK1 485 aa22.72■■□□□ 1.23
RER1-204ENST00000378518 TCEAL9Q9UHQ7 104 aa22.72■■□□□ 1.23
RER1-204ENST00000378518 CYP3A7-CYP3A51PA0A087WV96 503 aa22.71■■□□□ 1.23
RER1-204ENST00000378518 A0A0U1RQG5 324 aaPredicted RBP22.71■■□□□ 1.23
RER1-204ENST00000378518 HSP90AA1P07900 732 aaKnown RBP22.71■■□□□ 1.23
RER1-204ENST00000378518 PDCP20941 246 aa22.71■■□□□ 1.23
RER1-204ENST00000378518 CYP3A7P24462 503 aa22.71■■□□□ 1.23
RER1-204ENST00000378518 HSDL1Q3SXM5 330 aa22.71■■□□□ 1.23
RER1-204ENST00000378518 Q4G0T1 1027 aa22.71■■□□□ 1.23
RER1-204ENST00000378518 LARP1BQ659C4 914 aaKnown RBP22.71■■□□□ 1.23
RER1-204ENST00000378518 DPF3Q92784 378 aa22.71■■□□□ 1.23
RER1-204ENST00000378518 JPH1Q9HDC5 661 aaPredicted RBP22.71■■□□□ 1.23
RER1-204ENST00000378518 IPO5O00410 1097 aaKnown RBP22.7■■□□□ 1.22
RER1-204ENST00000378518 CCNT1O60563 726 aaKnown RBP22.7■■□□□ 1.22
RER1-204ENST00000378518 PPFIA4O75335 1185 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 TDP2O95551 362 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 SP4Q02446 784 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 EARS2Q5JPH6 523 aaKnown RBP22.7■■□□□ 1.22
RER1-204ENST00000378518 KATNAL1Q9BW62 490 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 SEZ6LQ9BYH1 1024 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 TBC1D22BQ9NU19 505 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 SLC9A2Q9UBY0 812 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 DDX25Q9UHL0 483 aaKnown RBP22.7■■□□□ 1.22
RER1-204ENST00000378518 SCN10AQ9Y5Y9 1956 aa22.7■■□□□ 1.22
RER1-204ENST00000378518 MROH7Q68CQ1 1323 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 EVI5O60447 810 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 SNX17Q15036 470 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 LRRC26Q2I0M4 334 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 C1orf53Q5VUE5 145 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 PPP4R3AQ6IN85 833 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 GPR20Q99678 358 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 BCAS3Q9H6U6 928 aa22.69■■□□□ 1.22
RER1-204ENST00000378518 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 EDIL3O43854 480 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 HOXD8P13378 290 aaPredicted RBP22.68■■□□□ 1.22
RER1-204ENST00000378518 RTP1P59025 263 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 ITGB3BPQ13352 177 aaPredicted RBP22.68■■□□□ 1.22
RER1-204ENST00000378518 ITGA7Q13683 1181 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 MCTP1Q6DN14 999 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 NOSTRINQ8IVI9 506 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 SEPT1Q8WYJ6 367 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 LENG9Q96B70 501 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 MBOAT7Q96N66 472 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 FOXD4L1Q9NU39 408 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 NOL7Q9UMY1 257 aaKnown RBP22.68■■□□□ 1.22
RER1-204ENST00000378518 ATP11BQ9Y2G3 1177 aa22.68■■□□□ 1.22
RER1-204ENST00000378518 DDX39AO00148 427 aaKnown RBP22.67■■□□□ 1.22
RER1-204ENST00000378518 MSH4O15457 936 aa22.67■■□□□ 1.22
RER1-204ENST00000378518 ARVCFO00192 962 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 MARCH6O60337 910 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 LGALS2P05162 132 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 ZNF286BP0CG31 522 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 U2AF2P26368 475 aaKnown RBP eCLIP22.66■■□□□ 1.226e-7■□□□□ 11
RER1-204ENST00000378518 TCF7P36402 384 aaPredicted RBP22.66■■□□□ 1.22
RER1-204ENST00000378518 PSMC6P62333 389 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 TRIM60Q495X7 471 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 TEKT3Q9BXF9 490 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 ZNF215Q9UL58 517 aaPredicted RBP22.66■■□□□ 1.22
RER1-204ENST00000378518 NR2E3Q9Y5X4 410 aa22.66■■□□□ 1.22
RER1-204ENST00000378518 TLR3O15455 904 aaKnown RBP22.65■■□□□ 1.22
RER1-204ENST00000378518 GAS7O60861 476 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 F2P00734 622 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 CHMP4BP1P59074 171 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 KRT76Q01546 638 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 UTP14CQ5TAP6 766 aaKnown RBP22.65■■□□□ 1.22
RER1-204ENST00000378518 LRCH2Q5VUJ6 765 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 C7orf61Q8IZ16 206 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 SLC5A5Q92911 643 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 UIMC1Q96RL1 719 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 RIT2Q99578 217 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 MYH9P35579 1960 aaKnown RBP22.65■■□□□ 1.22
RER1-204ENST00000378518 WDR81Q562E7 1941 aa22.65■■□□□ 1.22
RER1-204ENST00000378518 VPS37CA5D8V6 355 aaPredicted RBP22.64■■□□□ 1.21
RER1-204ENST00000378518 KIF28PB7ZC32 967 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 TBX3O15119 743 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 DHX15O43143 795 aaKnown RBP22.64■■□□□ 1.21
RER1-204ENST00000378518 SLC37A4O43826 429 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 BAG4O95429 457 aaKnown RBP22.64■■□□□ 1.21
RER1-204ENST00000378518 ATP2B1P20020 1258 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 TRAPPC10P48553 1259 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 PSEN2P49810 448 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 ACTR2P61160 394 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 BECN1Q14457 450 aa22.64■■□□□ 1.21
RER1-204ENST00000378518 MFSD10Q14728 455 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms