RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 VWA5AO00534 786 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 GOLGA8FQ08AF8 430 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 GOLGA8DPQ0D2H9 430 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 PPP2R5CQ13362 524 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 KRT26Q7Z3Y9 468 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 PPFIBP1Q86W92 1011 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 CCAR2Q8N163 923 aaKnown RBP27.82■■■□□ 2.04
CTSA-203ENST00000372459 TC2NQ8N9U0 490 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 HMGCS2P54868 508 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 MUM1L1Q5H9M0 696 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 MXRA8Q9BRK3 442 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 ZNF577Q9BSK1 485 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 HOMER2Q9NSB8 354 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 COL20A1Q9P218 1284 aa27.82■■■□□ 2.04
CTSA-203ENST00000372459 PARP14Q460N5 1801 aa27.81■■■□□ 2.04
CTSA-203ENST00000372459 PHIPQ8WWQ0 1821 aa27.81■■■□□ 2.04
CTSA-203ENST00000372459 EML1O00423 815 aa27.81■■■□□ 2.04
CTSA-203ENST00000372459 GAS7O60861 476 aa27.81■■■□□ 2.04
CTSA-203ENST00000372459 SYT2Q8N9I0 419 aaPredicted RBP27.81■■■□□ 2.04
CTSA-203ENST00000372459 ATG4CQ96DT6 458 aa27.81■■■□□ 2.04
CTSA-203ENST00000372459 SEMA6BQ9H3T3 888 aa27.81■■■□□ 2.04
CTSA-203ENST00000372459 AKR1B15C9JRZ8 316 aaPredicted RBP27.8■■■□□ 2.04
CTSA-203ENST00000372459 ADKP55263 362 aaKnown RBP27.8■■■□□ 2.04
CTSA-203ENST00000372459 FAM26FQ5R3K3 315 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.8■■■□□ 2.042e-13■■□□□ 14
CTSA-203ENST00000372459 C16orf45Q96MC5 204 aaPredicted RBP27.8■■■□□ 2.04
CTSA-203ENST00000372459 WDR11Q9BZH6 1224 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 TUFT1Q9NNX1 390 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.8■■■□□ 2.041e-6■■□□□ 13.6
CTSA-203ENST00000372459 RBBP6Q7Z6E9 1792 aaKnown RBP27.8■■■□□ 2.04
CTSA-203ENST00000372459 USP27XA6NNY8 438 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 KRT18P05783 430 aaKnown RBP27.8■■■□□ 2.04
CTSA-203ENST00000372459 CYP4A11Q02928 519 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 SYTL5Q8TDW5 730 aaPredicted RBP27.8■■■□□ 2.04
CTSA-203ENST00000372459 TRERF1Q96PN7 1200 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 SYT17Q9BSW7 474 aa27.8■■■□□ 2.04
CTSA-203ENST00000372459 ARP10275 920 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 BCRP11274 1271 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 PSMC6P62333 389 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 PABPC4Q13310 644 aaKnown RBP eCLIP27.79■■■□□ 2.042e-8■■□□□ 11.5
CTSA-203ENST00000372459 E4F1Q66K89 784 aaPredicted RBP27.79■■■□□ 2.04
CTSA-203ENST00000372459 BAG1Q99933 345 aaPredicted RBP27.79■■■□□ 2.04
CTSA-203ENST00000372459 TMOD4Q9NZQ9 345 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 POLR2AP24928 1970 aaKnown RBP27.79■■■□□ 2.04
CTSA-203ENST00000372459 TPM1P09493 284 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 LRRC63Q05C16 580 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 ARSHQ5FYA8 562 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 FOXR2Q6PJQ5 311 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 NIPA1Q7RTP0 329 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 TMEM139Q8IV31 216 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 MYOCDQ8IZQ8 938 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 HSD17B14Q9BPX1 270 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 TEKT3Q9BXF9 490 aa27.79■■■□□ 2.04
CTSA-203ENST00000372459 TRMT1Q9NXH9 659 aaKnown RBP27.79■■■□□ 2.04
CTSA-203ENST00000372459 LGALS16A8MUM7 142 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 ARHGAP6O43182 974 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 STX10O60499 249 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 DSG3P32926 999 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 UBXN1Q04323 297 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 RBL2Q08999 1139 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 DCPSQ96C86 337 aaKnown RBP27.78■■■□□ 2.04
CTSA-203ENST00000372459 ZFP91Q96JP5 570 aaPredicted RBP27.78■■■□□ 2.04
CTSA-203ENST00000372459 PANX2Q96RD6 677 aa27.78■■■□□ 2.04
CTSA-203ENST00000372459 FRMPD4Q14CM0 1322 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 NPHP3-ACAD11A0A0J9YXS1 232 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 FRMD3A2A2Y4 597 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 CHMP2AO43633 222 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 USP2O75604 605 aaPredicted RBP27.77■■■□□ 2.04
CTSA-203ENST00000372459 EYA4O95677 639 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 FGFR1OPO95684 399 aaKnown RBP27.77■■■□□ 2.04
CTSA-203ENST00000372459 ITGB5P18084 799 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 RPS6P62753 249 aaKnown RBP27.77■■■□□ 2.04
CTSA-203ENST00000372459 PRKG1Q13976 671 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 TRIM14Q14142 442 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 HERC4Q5GLZ8 1057 aaPredicted RBP27.77■■■□□ 2.04
CTSA-203ENST00000372459 PCNX4Q63HM2 1172 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 CNOT6LQ96LI5 555 aaKnown RBP27.77■■■□□ 2.04
CTSA-203ENST00000372459 RIT2Q99578 217 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 TSG101Q99816 390 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 RGL1Q9NZL6 768 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 AFG3L2Q9Y4W6 797 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 IPO5O00410 1097 aaKnown RBP27.77■■■□□ 2.04
CTSA-203ENST00000372459 CCP110O43303 1012 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 TNNT1P13805 278 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 MUTP22033 750 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 OAZ1P54368 228 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 COG2Q14746 738 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 TUBGCP2Q9BSJ2 902 aa27.77■■■□□ 2.04
CTSA-203ENST00000372459 LRRC41Q15345 812 aa27.76■■■□□ 2.03
CTSA-203ENST00000372459 RNF207Q6ZRF8 634 aa27.76■■■□□ 2.03
CTSA-203ENST00000372459 SULF1Q8IWU6 871 aa27.76■■■□□ 2.03
CTSA-203ENST00000372459 WNK4Q96J92 1243 aa27.76■■■□□ 2.03
CTSA-203ENST00000372459 ADAMTS5Q9UNA0 930 aa27.76■■■□□ 2.03
CTSA-203ENST00000372459 PCDHA2Q9Y5H9 948 aa27.76■■■□□ 2.03
CTSA-203ENST00000372459 SLITRK3O94933 977 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 KIF20AO95235 890 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 PRKCSHP14314 528 aaPredicted RBP27.75■■■□□ 2.03
CTSA-203ENST00000372459 CACNB1Q02641 598 aaPredicted RBP27.75■■■□□ 2.03
CTSA-203ENST00000372459 GIT2Q14161 759 aa27.75■■■□□ 2.03
CTSA-203ENST00000372459 PTPN14Q15678 1187 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms