RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CCAR1Q8IX12 1150 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 SMC1BQ8NDV3 1235 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 CXorf38Q8TB03 319 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 ENOX1Q8TC92 643 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 SYTL5Q8TDW5 730 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 DNAJC7Q99615 494 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 MKRN2Q9H000 416 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 KANSL2Q9H9L4 492 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 MINPP1Q9UNW1 487 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 ANKARQ7Z5J8 1434 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 BRD4O60885 1362 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 CPDO75976 1380 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 ZRANB2O95218 330 aaKnown RBP eCLIP6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 TAL1P17542 331 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 C4orf46Q504U0 113 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 ANKRD39Q53RE8 183 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 USHBP1Q8N6Y0 703 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 GNL3LQ9NVN8 582 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 DUSP13Q9UII6 198 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 ZNF281Q9Y2X9 895 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 VPS8Q8N3P4 1428 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 LY75O60449 1722 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 BRCA1P38398 1863 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 GPRASP1Q5JY77 1395 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 USP54Q70EL1 1684 aa6.3□□□□□ -1.4
ECHDC1-204ENST00000368292 COL18A1P39060 1754 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 N4BP2Q86UW6 1770 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 SIGLEC6O43699 453 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 DDAH1O94760 285 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 PRAMEF1O95521 474 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 ITGB5P18084 799 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 DCAF15Q66K64 600 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 MCTP1Q6DN14 999 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 COL23A1Q86Y22 540 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 C7orf61Q8IZ16 206 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 DAGLBQ8NCG7 672 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 TFCP2L1Q9NZI6 479 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 PCDHB10Q9UN67 800 aa6.29□□□□□ -1.4
ECHDC1-204ENST00000368292 USP6P35125 1406 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 KIF13BQ9NQT8 1826 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 DNAJC25-GNG10A0A024R161 153 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 ENPP3O14638 875 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 HSD3B2P26439 372 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 EGR3Q06889 387 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 CLEC16AQ2KHT3 1053 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 RALGPS1Q5JS13 557 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 ZNF655Q8N720 491 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 SH3TC2Q8TF17 1288 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 SMARCC1Q92922 1105 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 TCTN2Q96GX1 697 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 ALPK1Q96QP1 1244 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 FAM86C1Q9NVL1 165 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 CTNND2Q9UQB3 1225 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 NOP58Q9Y2X3 529 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 SLC12A7Q9Y666 1083 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 CNTNAP1P78357 1384 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 SBF1O95248 1867 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 TOGARAM1Q9Y4F4 1720 aa6.28□□□□□ -1.4
ECHDC1-204ENST00000368292 YTHDC2Q9H6S0 1430 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 ABCC6O95255 1503 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 CBFA2T2O43439 604 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 ZNF500O60304 480 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 PAPLNO95428 1278 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 CTSKP43235 329 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 GYS2P54840 703 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 TEKQ02763 1124 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 CCDC96Q2M329 555 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 BBS9Q3SYG4 887 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 C11orf96Q7Z7L8 435 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 ATG4DQ86TL0 474 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 SENP7Q9BQF6 1050 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 ADAMTS10Q9H324 1103 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 PHAXQ9H814 394 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 CHST7Q9NS84 486 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 SLAMF8Q9P0V8 285 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 FBXL21Q9UKT6 434 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 ZNF451Q9Y4E5 1061 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 PLEKHG2Q9H7P9 1386 aa6.27□□□□□ -1.41
ECHDC1-204ENST00000368292 ADGRF5Q8IZF2 1346 aa6.26□□□□□ -1.41
ECHDC1-204ENST00000368292 RGPD5Q99666 1765 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms