RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ZNF148Q9UQR1 794 aa18.76■□□□□ 0.59
CDCP1-201ENST00000296129 LMTK2Q8IWU2 1503 aa18.76■□□□□ 0.59
CDCP1-201ENST00000296129 RNF8O76064 485 aa18.76■□□□□ 0.59
CDCP1-201ENST00000296129 ZBTB33Q86T24 672 aa18.76■□□□□ 0.59
CDCP1-201ENST00000296129 MCUR1Q96AQ8 359 aa18.76■□□□□ 0.59
CDCP1-201ENST00000296129 FAM193BQ96PV7 902 aaPredicted RBP18.76■□□□□ 0.59
CDCP1-201ENST00000296129 UBE2TQ9NPD8 197 aaPredicted RBP18.76■□□□□ 0.59
CDCP1-201ENST00000296129 MROH7-TTC4A0A0A0MT08 1334 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 GIPC1O14908 333 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 ATP1A3P13637 1013 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 ATP1A2P50993 1020 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 SLC12A2P55011 1212 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 JPH2Q9BR39 696 aaPredicted RBP18.75■□□□□ 0.59
CDCP1-201ENST00000296129 DDX23Q9BUQ8 820 aaKnown RBP18.75■□□□□ 0.59
CDCP1-201ENST00000296129 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 CDC27P30260 824 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 NT5C2P49902 561 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 GPSM2P81274 684 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 PFDN4Q9NQP4 134 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 MYO1FO00160 1098 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 KCNQ2O43526 872 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 ARHGEF2Q92974 986 aaKnown RBP18.75■□□□□ 0.59
CDCP1-201ENST00000296129 TYW1Q9NV66 732 aaKnown RBP18.75■□□□□ 0.59
CDCP1-201ENST00000296129 FAM83BQ5T0W9 1011 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 ARMC9Q7Z3E5 817 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 PHLPP2Q6ZVD8 1323 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 ZBTB5O15062 677 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
CDCP1-201ENST00000296129 NME8Q8N427 588 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 SPTLC3Q9NUV7 552 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 PCDHA6Q9UN73 950 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 PCDHA8Q9Y5H6 950 aa18.75■□□□□ 0.59
CDCP1-201ENST00000296129 FAM196BA6NMK8 535 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 MAPK4P31152 587 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 KRT31Q15323 416 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 TTBK2Q6IQ55 1244 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 RPS6KC1Q96S38 1066 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 TDRD3Q9H7E2 651 aaKnown RBP18.74■□□□□ 0.59
CDCP1-201ENST00000296129 ARHGAP25P42331 645 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 RFX6Q8HWS3 928 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 GDAQ9Y2T3 454 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 UTYO14607 1347 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
CDCP1-201ENST00000296129 C2orf54Q08AI8 447 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 AP3B2Q13367 1082 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 RABGGTAQ92696 567 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 PTPREP23469 700 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 ZBED6P86452 979 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 RINT1Q6NUQ1 792 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 BHMT2Q9H2M3 363 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 NDST4Q9H3R1 872 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 LPXNO60711 386 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 SCARF1Q14162 830 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 SDCCAG8Q86SQ7 713 aaPredicted RBP18.73■□□□□ 0.59
CDCP1-201ENST00000296129 MB21D1Q8N884 522 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 TRIM11Q96F44 468 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 PPP1R16BQ96T49 567 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 SFI1A8K8P3 1242 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 GSG1L2A8MUP6 293 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 FTCDO95954 541 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 ARHGEF40Q8TER5 1519 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 POTEMA6NI47 508 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 A6NJR5 290 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
CDCP1-201ENST00000296129 TFAMQ00059 246 aaKnown RBP18.73■□□□□ 0.59
CDCP1-201ENST00000296129 LRRC63Q05C16 580 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 ITKQ08881 620 aa18.73■□□□□ 0.59
CDCP1-201ENST00000296129 PDZD4Q76G19 769 aaPredicted RBP18.73■□□□□ 0.59
CDCP1-201ENST00000296129 H7C0C1 242 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 SERPING1P05155 500 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 CASP1P29466 404 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 ATP5OP48047 213 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 MKRN3Q13064 507 aaKnown RBP18.72■□□□□ 0.59
CDCP1-201ENST00000296129 Q3C1V9 767 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 RNF207Q6ZRF8 634 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 NLRP7Q8WX94 980 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 RSRC1Q96IZ7 334 aaKnown RBP18.72■□□□□ 0.59
CDCP1-201ENST00000296129 RNF40O75150 1001 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 CXCR5P32302 372 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 GRM4Q14833 912 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 BBOF1Q8ND07 529 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 RILPQ96NA2 401 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 AP5M1Q9H0R1 490 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 PCDHA13Q9Y5I0 950 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 GOLGA8IPA6NC78 632 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 GOLGA8JA6NMD2 632 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 GBP1P32455 592 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 IREB2P48200 963 aaKnown RBP18.72■□□□□ 0.59
CDCP1-201ENST00000296129 TMED8Q6PL24 325 aaPredicted RBP18.72■□□□□ 0.59
CDCP1-201ENST00000296129 PANX2Q96RD6 677 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 PDE11AQ9HCR9 933 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 ADRA2BP18089 450 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 OSTNP61366 133 aa18.72■□□□□ 0.59
CDCP1-201ENST00000296129 MAGOHBQ96A72 148 aaKnown RBP18.72■□□□□ 0.59
CDCP1-201ENST00000296129 TMEM260Q9NX78 707 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms