RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 COL6A2P12110 1019 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 KCNMB1Q16558 191 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 FIGNQ5HY92 759 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 ADGRF1Q5T601 910 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 DDX46Q7L014 1031 aaKnown RBP6.3□□□□□ -1.4
CCDC54-201ENST00000261058 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 RPUSD2Q8IZ73 545 aaKnown RBP6.3□□□□□ -1.4
CCDC54-201ENST00000261058 CISD2Q8N5K1 135 aaKnown RBP6.3□□□□□ -1.4
CCDC54-201ENST00000261058 UBR7Q8N806 425 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 SMC1BQ8NDV3 1235 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 LEO1Q8WVC0 666 aaPredicted RBP6.3□□□□□ -1.4
CCDC54-201ENST00000261058 AP5M1Q9H0R1 490 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 NUDT5Q9UKK9 219 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 DSEQ9UL01 958 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 ATP8A1Q9Y2Q0 1164 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 SIT1Q9Y3P8 196 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 TELO2Q9Y4R8 837 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
CCDC54-201ENST00000261058 OR14I1A6ND48 311 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 ZNF891A8MT65 544 aaPredicted RBP6.29□□□□□ -1.4
CCDC54-201ENST00000261058 MAFKO60675 156 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 ZBTB7AO95365 584 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 SDHBP21912 280 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 SLC9A5Q14940 896 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 SKOR2Q2VWA4 1001 aaPredicted RBP6.29□□□□□ -1.4
CCDC54-201ENST00000261058 PLEKHN1Q494U1 663 aaPredicted RBP6.29□□□□□ -1.4
CCDC54-201ENST00000261058 KCTD1Q719H9 257 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 TTLL11Q8NHH1 800 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 CABP5Q9NP86 173 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
CCDC54-201ENST00000261058 F8W031 263 aaPredicted RBP6.28□□□□□ -1.4
CCDC54-201ENST00000261058 ABLIM1O14639 778 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 CLASP2O75122 1294 aaKnown RBP6.28□□□□□ -1.4
CCDC54-201ENST00000261058 FBLN1P23142 703 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 TXKP42681 527 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 NFKB2Q00653 900 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 TMEM62Q0P6H9 643 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 RAB3GAP1Q15042 981 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 FSTL4Q6MZW2 842 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 PTRH1Q86Y79 214 aaKnown RBP6.28□□□□□ -1.4
CCDC54-201ENST00000261058 MIB1Q86YT6 1006 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 C2orf69Q8N8R5 385 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 OR2W6PQ8NHA6 318 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 FAM168AQ92567 244 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 BOCQ9BWV1 1114 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 ZNF552Q9H707 407 aaPredicted RBP6.28□□□□□ -1.4
CCDC54-201ENST00000261058 MYOTQ9UBF9 498 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 HCFC2Q9Y5Z7 792 aa6.28□□□□□ -1.4
CCDC54-201ENST00000261058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.28□□□□□ -1.4
CCDC54-201ENST00000261058 SLC12A8A0AV02 714 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 PTPDC1A2A3K4 754 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 NUDT19A8MXV4 375 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 ZEB2O60315 1214 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 ATP2A2P16615 1042 aaKnown RBP6.27□□□□□ -1.41
CCDC54-201ENST00000261058 IBSPP21815 317 aaPredicted RBP6.27□□□□□ -1.41
CCDC54-201ENST00000261058 CNGA1P29973 690 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 PRR5P85299 388 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 DDX42Q86XP3 938 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC54-201ENST00000261058 NLGN4XQ8N0W4 816 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 NXPE1Q8N323 547 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 DLG3Q92796 817 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 RXFP1Q9HBX9 757 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 HSPBP1Q9NZL4 362 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 NUB1Q9Y5A7 615 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 PCDHB4Q9Y5E5 795 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 B3GALT1Q9Y5Z6 326 aa6.27□□□□□ -1.41
CCDC54-201ENST00000261058 hCG_2014768A0A024R1R8 64 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 SLC27A2O14975 620 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 BRINP1O60477 761 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 ADCYAP1R1P41586 468 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 CDKN1CP49918 316 aaPredicted RBP6.26□□□□□ -1.41
CCDC54-201ENST00000261058 SCNN1BP51168 640 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 IRAK1P51617 712 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 TUSC3Q13454 348 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 SEC23AQ15436 765 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 CT47A1Q5JQC4 288 aaPredicted RBP6.26□□□□□ -1.41
CCDC54-201ENST00000261058 MILR1Q7Z6M3 343 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.26□□□□□ -1.41
CCDC54-201ENST00000261058 TRIM48Q8IWZ4 208 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 ANKRD13AQ8IZ07 590 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 CLEC4DQ8WXI8 215 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 CD244Q9BZW8 370 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCDC54-201ENST00000261058 IRS2Q9Y4H2 1338 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 PHLDB1Q86UU1 1377 aa6.26□□□□□ -1.41
CCDC54-201ENST00000261058 NEMP1O14524 444 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 DVL2O14641 736 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 PEX10O60683 326 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 GAS7O60861 476 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 KRT15P19012 456 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 GJA4P35212 333 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 PDE6BP35913 854 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 LSSP48449 732 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 IRF9Q00978 393 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 STRN3Q13033 797 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 ZC3H14Q6PJT7 736 aaKnown RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 PRPF38AQ8NAV1 312 aaKnown RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 ARRDC4Q8NCT1 418 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms