RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 RnmtQ9D0L8 465 aaKnown RBP17.37■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Smchd1Q6P5D8 2007 aaKnown RBP17.37■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Gcnt4E9Q649 455 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Gm4758L7N258 96 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Abcb4P21440 1276 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Ddx49Q4FZF3 480 aaKnown RBP17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Tbc1d22bQ80VE5 505 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Ccz1Q8C1Y8 480 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Vmn1r199Q8R280 367 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Copb1Q9JIF7 953 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Ccdc78D3Z5T1 437 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 SfnO70456 248 aaKnown RBP17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Rasip1Q3U0S6 961 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Otud5Q3U2S4 566 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Slc9a2Q3ZAS0 814 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Mtmr6Q8VE11 617 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Spdl1Q923A2 608 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Chaf1aQ9QWF0 911 aa17.36■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Gm4985A2ALC6 410 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Vmn2r79E9Q067 851 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 AurkbO70126 345 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Myo1aO88329 1043 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 GmnnO88513 206 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Magea8O89012 320 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Adamts10P58459 1104 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 PtgdrP70263 357 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Nlrp4cQ3TKR3 982 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Jade2Q6ZQF7 829 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Usp17leQ7M764 540 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Raver2Q7TPD6 673 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Atg4cQ811C2 458 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Sun2Q8BJS4 731 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Pgm5Q8BZF8 567 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Fam20aQ8CID3 541 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Rbm41Q8JZV4 413 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Spon1Q8VCC9 807 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Rbp7Q9EPC5 134 aa17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Mrvi1Q9WUX5 899 aaKnown RBP17.35■□□□□ 0.37
Ubp1-206ENSMUST00000216558 PfasQ5SUR0 1337 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Gm45208A0A140LJ36 292 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 RdxP26043 583 aaKnown RBP17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Samsn1P57725 372 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Hmgb1P63158 215 aaKnown RBP17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Kcnd1Q03719 651 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Herc4Q6PAV2 1057 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Tc2nQ91XT6 489 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Mov10l1Q99MV5 1187 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Ifi35Q9D8C4 286 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 SelenooQ9DBC0 667 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Cabp5Q9JLK3 173 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Phtf1Q9QZ09 761 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Tex21Q9R0U9 575 aa17.34■□□□□ 0.37
Ubp1-206ENSMUST00000216558 TazI7HJS2 263 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 B020004C17RikJ3QP07 232 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Lmntd2Q0VET5 664 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Gzf1Q4VBD9 706 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Ankrd40Q5SUE8 363 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Cyp26b1Q811W2 512 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Dhx32Q8BZS9 744 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Il31raQ8K5B1 716 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Extl3Q9WVL6 918 aa17.33■□□□□ 0.37
Ubp1-206ENSMUST00000216558 Pip4k2aO70172 405 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Trim43cP86449 446 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Nom1Q3UFM5 854 aaKnown RBP17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Vwa3aQ3UVV9 1148 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 P4ha1Q60715 534 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 PicalmQ7M6Y3 660 aaKnown RBP17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Lrrc41Q8K1C9 807 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Cacnb1Q8R3Z5 597 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Tgs1Q923W1 853 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 PpihQ9D868 188 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 AmfrQ9R049 643 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Gm4907B1AXB9 411 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Atp9aO70228 1047 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 MyocO70624 490 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Tal1P22091 329 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Epb41l4aP52963 686 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Stim2P83093 746 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Gucy2cQ3UWA6 1072 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Scarf1Q5ND28 820 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 D130040H23RikQ8BII3 405 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Q8C5C9 218 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Rtp1Q8C8C1 263 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Rhobtb2Q91V93 728 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Tbx18Q9EPZ6 613 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Tmod4Q9JLH8 345 aa17.32■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Sbno2Q7TNB8 1349 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Col11a1Q61245 1804 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Atp11aP98197 1187 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Eepd1Q3TGW2 569 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Sh2d1b2Q45HK4 132 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Tsg101Q61187 391 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Igbp1Q61249 340 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Mcm7Q61881 719 aaKnown RBP17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Entpd3Q8BFW6 529 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Spata32Q8C5V0 334 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Ano2Q8CFW1 1002 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Usp33Q8R5K2 909 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Mical1Q8VDP3 1048 aa17.31■□□□□ 0.36
Ubp1-206ENSMUST00000216558 Pstpip2Q99M15 334 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms