RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Utp18Q5SSI6 552 aaKnown RBP17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 NostrinQ6WKZ7 506 aa17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Tbc1d22bQ80VE5 505 aa17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Slitrk3Q810B9 980 aa17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 LRWD1Q8BUI3 648 aaKnown RBP17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Usp20Q8C6M1 916 aa17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Mcoln1Q99J21 580 aa17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Pabpc6Q9D4E6 643 aaKnown RBP17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Ppp2r3dQ9Z176 491 aa17.49■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Smim10l2aA0A0B4J1F8 78 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Tmem240B2RWJ3 173 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Capn2O08529 700 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Sptlc1O35704 473 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Rnf19aP50636 840 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Actr2P61161 394 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Ppp4r2Q0VGB7 417 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Gtf2a2Q80ZM7 109 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Ccdc172Q810N9 267 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Kdm4aQ8BW72 1064 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 KinQ8K339 391 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 DutQ8VCG1 200 aaKnown RBP17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Trpv6Q91WD2 767 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Dph6Q9CQ28 267 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Hip1rQ9JKY5 1068 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Fbxo16Q9QZM9 334 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 AdnpQ9Z103 1108 aaKnown RBP17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 1110002E22RikE0CYV9 1786 aa17.48■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Wdr33Q8K4P0 1330 aaKnown RBP17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Smchd1Q6P5D8 2007 aaKnown RBP17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Smarce1O54941 411 aaKnown RBP17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Cbfa2t2O70374 594 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Lta4hP24527 611 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Cyp2f2P33267 491 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Lrrfip1Q3UZ39 729 aaKnown RBP17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Smad3Q8BUN5 425 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Ca12Q8CI85 354 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 SdsQ8VBT2 327 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 MutyhQ99P21 515 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Tmod3Q9JHJ0 352 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Nr2e3Q9QXZ7 395 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Lypla2Q9WTL7 231 aa17.47■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Gm7356A0A087WSA6 508 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Tex13cD3YU32 604 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 2610008E11RikG3X964 669 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Gnrh1P13562 90 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Hps5P59438 1126 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Ctdnep1Q3TP92 244 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Kif5bQ61768 963 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Tfe3Q64092 572 aaKnown RBP17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Kcnj14Q8JZN3 434 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Tmco4Q91WU4 631 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Arhgap8Q9CXP4 425 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 Trpm5Q9JJH7 1158 aa17.46■□□□□ 0.39
Hmgb1-208ENSMUST00000139443 LctF8VPT3 1931 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Zfp853A0A1D5RM95 733 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 TazI7HJS2 263 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 P01644 108 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 P01645 108 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 P01646 108 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 P01647 108 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Ccl5P30882 91 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Grik5Q61626 979 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Mcf2lQ64096 1149 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Cnnm4Q69ZF7 771 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Ssh1Q76I79 1042 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Nap1l4Q78ZA7 375 aaKnown RBP17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Fbxl21Q8BFZ4 434 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 N4bp3Q8C7U1 537 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Arpp21Q9DCB4 807 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Ccnt1Q9QWV9 724 aaKnown RBP17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Map2k5Q9WVS7 448 aa17.45■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Arhgef26D3YYY8 869 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 MafgO54790 162 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Pcif1P59114 706 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Il1rapl1P59823 695 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Spink5Q148R4 1017 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Xkr5Q5GH66 676 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gas6Q61592 674 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Amer1Q7TS75 1132 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Eif4bQ8BGD9 611 aaKnown RBP17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Fbxo44Q8BK26 255 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Grik4Q8BMF5 956 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Evc2Q8K1G2 1220 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Nrbp1Q99J45 535 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Asah2Q9JHE3 756 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Lama3Q61789 3330 aa17.44■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Ank3G5E8K5 1961 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Casp8ap2Q9WUF3 1962 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gm13941A2AJ38 245 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Diaph1O08808 1255 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Lrrc36Q3V0M2 755 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gas7Q60780 421 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Madcam1Q61826 405 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Cyp4f39Q8BGU0 532 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Pi4kbQ8BKC8 816 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Zmynd15Q8C0R7 736 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 VcpkmtQ8C436 228 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Prmt7Q922X9 692 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 IydQ9DCX8 285 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Tfr2Q9JKX3 798 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms