RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Lpin2Q99PI5 893 aa17.19■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ccdc43Q9CR29 222 aaKnown RBP17.19■□□□□ 0.34
Vcan-201ENSMUST00000109543 Rpf2Q9JJ80 306 aaKnown RBP17.19■□□□□ 0.34
Vcan-201ENSMUST00000109543 Krt36B1AQ75 473 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Snx12O70493 165 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Pafah1b1P63005 410 aaKnown RBP17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Top1Q04750 767 aaKnown RBP17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Gtpbp6Q3U6U5 514 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Atp13a3Q5XF89 1219 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 CnstQ8CBC4 711 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Q9DAQ4 598 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Add1Q9QYC0 735 aaKnown RBP17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 DexiQ9WUQ7 95 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Gm3095E9Q058 166 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Eps15P42567 897 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Map9Q3TRR0 646 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Gm5169Q5M8P2 212 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Rgl1Q60695 768 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Dhx37Q6NZL1 1150 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Klhl20Q8VCK5 604 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Olfr805Q8VFI4 319 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Lrp2bpQ9D4C6 346 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Cmtm5Q9D6G9 156 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Eif2ak3Q9Z2B5 1114 aa17.18■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ttc38A3KMP2 465 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Eddm13E9Q7F5 164 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Vmn2r78K7N6U5 853 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Enc1O35709 589 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Hoxa11P31311 313 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Vsnl1P62761 191 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Tubb4bP68372 445 aaKnown RBP17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Sfi1Q3UZY0 1216 aaKnown RBP17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Brd2Q7JJ13 798 aaKnown RBP17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 P2ry10Q8BFU7 328 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Rpap2Q8VC34 614 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Mrpl11Q9CQF0 192 aaKnown RBP17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Pabpc6Q9D4E6 643 aaKnown RBP17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Slc12a7Q9WVL3 1083 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Bcorl1A2AQH4 1781 aa17.17■□□□□ 0.34
Vcan-201ENSMUST00000109543 Grik5Q61626 979 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Exoc8Q6PGF7 716 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Pym1Q8CHP5 203 aaKnown RBP17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Acat1Q8QZT1 424 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 PccaQ91ZA3 724 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 1700020D05RikQ99PB1 294 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Myl7Q9QVP4 175 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Zfp984A2A7A2 547 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Nr2f2P43135 414 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 CtshP49935 333 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Actn4P57780 912 aaKnown RBP17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 SlmapQ3URD3 845 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Churc1Q6DG52 112 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ccdc93Q7TQK5 629 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Zhx2Q8C0C0 836 aaKnown RBP17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ago4Q8CJF8 861 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 ThegQ9JMB1 375 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Fam205a1D3YZF6 1314 aa17.16■□□□□ 0.34
Vcan-201ENSMUST00000109543 Trappc11B2RXC1 1133 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Cetn3O35648 167 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 LdhbP16125 334 aaKnown RBP17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Trim43cP86449 446 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Tcerg1lQ3B807 590 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 MpndQ3TV65 487 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Rsad1Q5SUV1 442 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ccdc88cQ6VGS5 2009 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Tmc3Q7TQ69 1130 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ddx10Q80Y44 875 aaKnown RBP17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Tmem39bQ810L4 492 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Vgll2Q8BGW8 322 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Vcpip1Q8CDG3 1220 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Prpf6Q91YR7 941 aaKnown RBP17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Prss51A0A286YDY8 319 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Gfpt1P47856 697 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Nlrp4cQ3TKR3 982 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Ankrd13cQ3UX43 541 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Gm2163Q6PCY5 473 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Dppa3Q8QZY3 150 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Hdac9Q99N13 588 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Q9D5Q8 446 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 PpihQ9D868 188 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Pex11aQ9Z211 246 aa17.15■□□□□ 0.34
Vcan-201ENSMUST00000109543 Dnajb6O54946 365 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 CatspereP0DP43 985 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Gna14P30677 355 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Anp32eP97822 260 aaKnown RBP17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Kif5bQ61768 963 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 NntQ61941 1086 aaKnown RBP17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 GartQ64737 1010 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Sgms1Q8VCQ6 419 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Tdrd3Q91W18 743 aaKnown RBP17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Smc1aQ9CU62 1233 aaKnown RBP17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Txnrd2Q9JLT4 524 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Klra10Q9R1G6 266 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Lypla2Q9WTL7 231 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Mrvi1Q9WUX5 899 aaKnown RBP17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Zfp597E9Q6S0 419 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Rgs22G3UYX5 1258 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Kcnh2O35219 1162 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Nr1i3O35627 358 aa17.14■□□□□ 0.33
Vcan-201ENSMUST00000109543 Tph1P17532 447 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms