RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Tpp1O89023 562 aa19.3■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Exosc10P56960 887 aaKnown RBP19.3■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Atp1b3P97370 278 aa19.3■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Irak1Q62406 710 aa19.3■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ppfia2Q8BSS9 1257 aa19.3■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ulbp1Q8HWA3 334 aa19.3■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Vmn2r71L7N2D8 855 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Madcam1Q61826 405 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Rabep2Q91WG2 554 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Nek8Q91ZR4 698 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Atp10bB1AWN4 1474 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Hace1Q3U0D9 909 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 KynuQ9CXF0 464 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Prmt9Q3U3W5 846 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Mtrf1lQ8BJU9 373 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Alx1Q8C8B0 326 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Catsper1Q91ZR5 686 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Snx1Q9WV80 522 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Vmn2r23E9PXI5 849 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 HarsQ61035 509 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 OcrlQ6NVF0 900 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ranbp17Q99NF8 1088 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 MlklQ9D2Y4 472 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Thap2Q9D305 217 aa19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Iqgap1Q9JKF1 1657 aaKnown RBP19.29■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Flt4P35917 1363 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Znf541Q0GGX2 1363 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Casq2O09161 415 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Xbp1O35426 267 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Fen1P39749 378 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 GmipQ6PGG2 971 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Rassf6Q80UQ2 353 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ehd2Q8BH64 543 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Atg16l1Q8C0J2 607 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Tmem134Q8R0J4 195 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Nrbf2Q8VCQ3 287 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ccdc70Q9D9B0 223 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Styxl1Q9DAR2 321 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Cyth1Q9QX11 398 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Mroh2aD3Z750 1679 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Sik3Q6P4S6 1311 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Casp12O08736 419 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 LbrQ3U9G9 626 aaKnown RBP19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 RgmbQ7TQ33 436 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Slc35g1Q8BY79 368 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Aoc3O70423 765 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 YarsQ91WQ3 528 aaKnown RBP19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Fam81bA0A140LI28 432 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Exoc4O35382 975 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ap1m1P35585 423 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Rasgrf2P70392 1189 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Lamc2Q61092 1191 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Myo6Q64331 1265 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Tut1Q8R3F9 869 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Eif2ak1Q9Z2R9 619 aa19.28■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 RpsaP14206 295 aaKnown RBP19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Hcls1P49710 486 aaKnown RBP19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Kpna2P52293 529 aaKnown RBP19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Cep126Q0VBV7 1103 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Fnbp1Q80TY0 616 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 ArpinQ9D0A3 226 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Cog7Q3UM29 770 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Q91WD4 421 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Cap2Q9CYT6 476 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Med7Q9CZB6 233 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 IcoslgQ9JHJ8 322 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Nck2O55033 380 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 NxnP97346 435 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Zscan2Q07230 614 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Slc26a6Q8CIW6 758 aa19.27■□□□□ 0.68
Col4a3bp-202ENSMUST00000109444 Ccdc24E9PUW8 296 aa19.27■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Phldb3E9QAF4 648 aa19.27■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Foxp2P58463 714 aa19.27■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Haus7Q8BKT8 364 aa19.27■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Bud13Q8R149 637 aa19.27■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Cdc27A2A6Q5 825 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Pus7B7ZNL8 666 aaKnown RBP19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Gm1661E9Q963 441 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Cav1P49817 178 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Tmod4Q9JLH8 345 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 PtgdrP70263 357 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Prpsap2Q8R574 369 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Zkscan3Q91VW9 553 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Peg12Q9WVA7 283 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Ttc13A0A1L1SSC7 844 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Prr5lA2AVJ5 370 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Gucy2eP52785 1108 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Pfdn6Q03958 127 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Taf12Q8VE65 161 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Gm21962L7N280 338 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Slc3a2P10852 526 aaKnown RBP19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Tfdp1Q08639 410 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Miga1Q4QQM5 600 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Epc1Q8C9X6 813 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Lmbrd1Q8K0B2 537 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 MlxiplQ99MZ3 864 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Mageb16Q9CWV4 363 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 GakQ99KY4 1305 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Cdc42bpgQ80UW5 1551 aa19.26■□□□□ 0.67
Col4a3bp-202ENSMUST00000109444 Pla2g4bP0C871 782 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms