RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Rnf181Q9CY62 165 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Zfp804bA0A0G2JGH6 1343 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Wdr33Q8K4P0 1330 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Piezo1E2JF22 2547 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm21936A0A1Y7VJE9 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm5788A0A1Y7VK80 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm3618D3Z4P5 127 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Usp17lbE9Q9U0 468 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm5039J3QNT6 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm2035J3QP87 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Vti1aO89116 217 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Kif3aP28741 701 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Acsl1P41216 699 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 LeprP48356 1162 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Sash1P59808 1230 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Rps12P63323 132 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm2016Q3TQZ4 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Esyt1Q3U7R1 1092 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm8332Q3UTA4 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 EspnlQ3UYR4 1005 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 FcrlbQ5DRQ8 427 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 E2f5Q61502 335 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Dennd5aQ6PAL8 1287 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Ppp1r10Q80W00 888 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Fam102bQ8BQS4 339 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Olfml1Q8BSH2 233 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 AbraQ8BUZ1 375 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm5662Q8BX20 144 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Usp44Q8C2S0 711 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Wdr24Q8CFJ9 790 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Shtn1Q8K2Q9 631 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Pof1bQ8K4L4 587 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Zcchc18Q8VD24 393 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Plagl2Q925T4 496 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Rdm1Q9CQK3 281 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Polr3kQ9CQZ7 108 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Pgpep1Q9ESW8 209 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Add3Q9QYB5 706 aaKnown RBP8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Scn10aQ6QIY3 1958 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Kmt2eQ3UG20 1868 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Lama3Q61789 3330 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Phrf1A6H619 1682 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 InsrrQ9WTL4 1300 aa8.27□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Ccdc88aQ5SNZ0 1873 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Prl3d3A0A0M6L0J6 224 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 AV320801A2AWL3 467 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Zkscan7E9PVW1 718 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm8882E9Q7E4 283 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gm15023L7MUB4 467 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Psmd14O35593 310 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Pcsk2P21661 637 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Stat1P42225 749 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Yap1P46938 488 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Kcnj6P48542 425 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Eva1cP58659 440 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Traf5P70191 558 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 NfixP70257 488 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 NxnP97346 435 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Q3UJP5 209 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Q3UK37 420 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Foxred2Q3USW5 665 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 HecaQ3V1N5 544 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Cpa2Q504N0 417 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Ecm1Q61508 559 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 R3hcc1Q8BSI6 488 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Rps6ka5Q8C050 863 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Mknk2Q8CDB0 459 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Fubp1Q91WJ8 651 aaKnown RBP8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Srgap1Q91Z69 1062 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Erc1Q99MI1 1120 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Mx2Q9WVP9 655 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Myh1Q5SX40 1942 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 MypnQ5DTJ9 1315 aa8.26□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Sec14l1A8Y5H7 715 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Speer4aF8VPX6 267 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Cfap73J3QPZ5 306 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Cavin1O54724 392 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Fkbp1aP26883 108 aaKnown RBP8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Igfbp6P47880 238 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Nucb2P81117 420 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Pkp1P97350 728 aaKnown RBP8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Gsk3aQ2NL51 490 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Tmem109Q3UBX0 243 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Zbtb40Q6PCS8 1258 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Smarcc2Q6PDG5 1213 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Spock3Q8BKV0 436 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Tmem266Q8BZB3 538 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Smc4Q8CG47 1286 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Nek9Q8K1R7 984 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Nop14Q8R3N1 860 aaKnown RBP8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Adam1bQ8R534 806 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Rnf144aQ925F3 292 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Ppil2Q9D787 521 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Moap1Q9ERH6 352 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Zcchc17Q9ESX4 241 aaKnown RBP8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Prl2a1Q9JHK0 228 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Myo15bI7HPW8 3033 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Wdr19Q3UGF1 1341 aa8.25□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Ugt1a5B2RT14 529 aa8.24□□□□□ -1.09
Ccdc47-202ENSMUST00000106865 Wdr78E9PYY5 807 aa8.24□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms