RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	ZIM17	P42844	174 aa		0.04	□□□□□ -2.4
snR45	snR45	YFL064C	P43540	174 aa		0.04	□□□□□ -2.4
snR45	snR45	DLD2	P46681	530 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	FYV8	P46949	817 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	NCA3	P46955	337 aa		0.04	□□□□□ -2.4
snR45	snR45	CTK3	P46963	296 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	ABM1	P47146	123 aa		0.04	□□□□□ -2.4
snR45	snR45	PUS4	P48567	403 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	RNR4	P49723	345 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	TRM9	P49957	279 aa		0.04	□□□□□ -2.4
snR45	snR45	FMS1	P50264	508 aa		0.04	□□□□□ -2.4
snR45	snR45	NBP35	P52920	328 aa		0.04	□□□□□ -2.4
snR45	snR45	EMC4	P53073	190 aa		0.04	□□□□□ -2.4
snR45	snR45	HUL5	P53119	910 aa		0.04	□□□□□ -2.4
snR45	snR45	MNP1	P53163	194 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	COG7	P53195	279 aa		0.04	□□□□□ -2.4
snR45	snR45	MNT4	P53745	580 aa		0.04	□□□□□ -2.4
snR45	snR45	NCS2	P53923	493 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	NOP15	P53927	220 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	ALG11	P53954	548 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	RHO3	Q00245	231 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	CEG1	Q01159	459 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	MRS2	Q01926	470 aa		0.04	□□□□□ -2.4
snR45	snR45	MUB1	Q03162	620 aa		0.04	□□□□□ -2.4
snR45	snR45	PIR3	Q03180	325 aa		0.04	□□□□□ -2.4
snR45	snR45	TAF12	Q03761	539 aa		0.04	□□□□□ -2.4
snR45	snR45	PEX12	Q04370	399 aa		0.04	□□□□□ -2.4
snR45	snR45	PLM2	Q04383	521 aa		0.04	□□□□□ -2.4
snR45	snR45	PRM6	Q04705	352 aa		0.04	□□□□□ -2.4
snR45	snR45	RRN11	Q04712	507 aa		0.04	□□□□□ -2.4
snR45	snR45	RTN1	Q04947	295 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	PEX10	Q05568	337 aa		0.04	□□□□□ -2.4
snR45	snR45	COQ9	Q05779	260 aa		0.04	□□□□□ -2.4
snR45	snR45	GAS2	Q06135	555 aa		0.04	□□□□□ -2.4
snR45	snR45	RDS3	Q06835	107 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	ENT4	Q07872	247 aa		0.04	□□□□□ -2.4
snR45	snR45	ATG10	Q07879	167 aa		0.04	□□□□□ -2.4
snR45	snR45	TEN1	Q07921	160 aa		0.04	□□□□□ -2.4
snR45	snR45	PLB3	Q08108	686 aa		0.04	□□□□□ -2.4
snR45	snR45	CLP1	Q08685	445 aa	Predicted RBP	0.04	□□□□□ -2.4
snR45	snR45	YOR376W	Q08900	122 aa		0.04	□□□□□ -2.4
snR45	snR45	UIP4	Q08926	304 aa		0.04	□□□□□ -2.4
snR45	snR45	YPR202W	Q08993	238 aa		0.04	□□□□□ -2.4
snR45	snR45	TAF10	Q12030	206 aa		0.04	□□□□□ -2.4
snR45	snR45	HFI1	Q12060	488 aa		0.04	□□□□□ -2.4
snR45	snR45	NUR1	Q12066	484 aa		0.04	□□□□□ -2.4
snR45	snR45	PER33	Q12144	273 aa		0.04	□□□□□ -2.4
snR45	snR45	YPL150W	Q12152	901 aa		0.04	□□□□□ -2.4
snR45	snR45	RUP1	Q12242	671 aa		0.04	□□□□□ -2.4
snR45	snR45	SMC6	Q12749	1114 aa		0.04	□□□□□ -2.4
snR45	snR45	RRP12	Q12754	1228 aa	Known RBP	0.04	□□□□□ -2.4
snR45	snR45	RAD61	Q99359	647 aa		0.04	□□□□□ -2.4
snR45	snR45	VCX1	Q99385	411 aa		0.04	□□□□□ -2.4
snR45	snR45	RAD50	P12753	1312 aa		0.04	□□□□□ -2.4
snR45	snR45	HXK2	P04807	486 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	ARG81	P05085	880 aa		0.03	□□□□□ -2.4
snR45	snR45	STE3	P06783	470 aa		0.03	□□□□□ -2.4
snR45	snR45	MET2	P08465	486 aa		0.03	□□□□□ -2.4
snR45	snR45	NUC1	P08466	329 aa		0.03	□□□□□ -2.4
snR45	snR45	ASP3-2	P0CX77	362 aa		0.03	□□□□□ -2.4
snR45	snR45	ASP3-3	P0CX78	362 aa		0.03	□□□□□ -2.4
snR45	snR45	ASP3-4	P0CX79	362 aa		0.03	□□□□□ -2.4
snR45	snR45	ASP3-1	P0CZ17	362 aa		0.03	□□□□□ -2.4
snR45	snR45	PHO8	P11491	566 aa		0.03	□□□□□ -2.4
snR45	snR45	KAR1	P11927	433 aa		0.03	□□□□□ -2.4
snR45	snR45	NSP1	P14907	823 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	ARF2	P19146	181 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	PRP2	P20095	876 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	RPO26	P20435	155 aa		0.03	□□□□□ -2.4
snR45	snR45	DAL81	P21657	970 aa		0.03	□□□□□ -2.4
snR45	snR45	ROX3	P25046	220 aa		0.03	□□□□□ -2.4
snR45	snR45	SWI4	P25302	1093 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	CWH43	P25618	953 aa		0.03	□□□□□ -2.4
snR45	snR45	RPS5	P26783	225 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	PRR1	P28708	518 aa		0.03	□□□□□ -2.4
snR45	snR45	ERG9	P29704	444 aa		0.03	□□□□□ -2.4
snR45	snR45	FAA1	P30624	700 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	CRM1	P30822	1084 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	PMT2	P31382	759 aa		0.03	□□□□□ -2.4
snR45	snR45	PET309	P32522	965 aa	Predicted RBP	0.03	□□□□□ -2.4
snR45	snR45	VMA11	P32842	164 aa		0.03	□□□□□ -2.4
snR45	snR45	SFC1	P33303	322 aa		0.03	□□□□□ -2.4
snR45	snR45	TKL2	P33315	681 aa		0.03	□□□□□ -2.4
snR45	snR45	CAB3	P36076	571 aa		0.03	□□□□□ -2.4
snR45	snR45	PHD1	P36093	366 aa		0.03	□□□□□ -2.4
snR45	snR45	RPC37	P36121	282 aa		0.03	□□□□□ -2.4
snR45	snR45	MRPL37	P36532	105 aa		0.03	□□□□□ -2.4
snR45	snR45	YCR041W	P37265	110 aa		0.03	□□□□□ -2.4
snR45	snR45	AGP2	P38090	596 aa		0.03	□□□□□ -2.4
snR45	snR45	PCH2	P38126	564 aa		0.03	□□□□□ -2.4
snR45	snR45	FUI1	P38196	639 aa		0.03	□□□□□ -2.4
snR45	snR45	CDS1	P38221	457 aa		0.03	□□□□□ -2.4
snR45	snR45	ZTA1	P38230	334 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	TRM7	P38238	310 aa	Known RBP	0.03	□□□□□ -2.4
snR45	snR45	VID24	P38263	362 aa		0.03	□□□□□ -2.4
snR45	snR45	YBR225W	P38321	900 aa		0.03	□□□□□ -2.4
snR45	snR45	NPR3	P38742	1146 aa		0.03	□□□□□ -2.4
snR45	snR45	YHR035W	P38769	630 aa		0.03	□□□□□ -2.4
snR45	snR45	VPS45	P38932	577 aa		0.03	□□□□□ -2.4
snR45	snR45	CCT6	P39079	546 aa		0.03	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms