RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	APE3	P37302	537 aa	Known RBP	2.68	□□□□□ -1.98
SFM1	YOR021C	SLM4	P38247	162 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	RFC3	P38629	340 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	SRP72	P38688	640 aa	Known RBP	2.68	□□□□□ -1.98
SFM1	YOR021C	ALG8	P40351	577 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	ELP2	P42935	788 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	URB2	P47108	1174 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	COS10	P52924	374 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	YIP1	P53039	248 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	DSL1	P53847	754 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	NCS2	P53923	493 aa	Predicted RBP	2.68	□□□□□ -1.98
SFM1	YOR021C	OCA2	P53949	197 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	CRZ1	P53968	678 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	ACL4	Q03771	387 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	ERP1	Q05359	219 aa	Known RBP	2.68	□□□□□ -1.98
SFM1	YOR021C	DON1	Q05610	365 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	SOR2	Q07786	357 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	YPR022C	Q12139	1133 aa		2.68	□□□□□ -1.98
SFM1	YOR021C	ILV5	P06168	395 aa	Known RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	CHS1	P08004	1131 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	CLC1	P17891	233 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	RNA14	P25298	677 aa	Known RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	ITR1	P30605	584 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	PRO3	P32263	286 aa	Known RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	NDI1	P32340	513 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	APE2	P32454	952 aa	Known RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	ECM25	P32525	599 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	GLC7	P32598	312 aa	Known RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	NTC20	P38302	140 aa	Predicted RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	RRP4	P38792	359 aa	Known RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	MDM31	P38880	579 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	YJL213W	P40896	331 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	CAK1	P43568	368 aa	Predicted RBP	2.67	□□□□□ -1.98
SFM1	YOR021C	YDL186W	P48568	277 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	SKO1	Q02100	647 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	VPS54	Q12071	889 aa		2.67	□□□□□ -1.98
SFM1	YOR021C	COX3	P00420	269 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	HIP1	P06775	603 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	YAR066W	P0CX18	203 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	YHR214W	P0CX19	203 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	SAM1	P10659	382 aa	Known RBP	2.66	□□□□□ -1.98
SFM1	YOR021C	ARO3	P14843	370 aa	Known RBP	2.66	□□□□□ -1.98
SFM1	YOR021C	SAM2	P19358	384 aa	Known RBP	2.66	□□□□□ -1.98
SFM1	YOR021C	CLN1	P20437	546 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	PUT3	P25502	979 aa	Predicted RBP	2.66	□□□□□ -1.98
SFM1	YOR021C	KRE2	P27809	442 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	BRF1	P29056	596 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	ECM27	P47144	725 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	PHB2	P50085	310 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	POP6	P53218	158 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	PNG1	Q02890	363 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	GYL1	Q04322	720 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	HEL2	Q05580	639 aa	Known RBP	2.66	□□□□□ -1.98
SFM1	YOR021C	GPM3	Q12326	303 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	YBR298C-A	Q8TGK4	73 aa		2.66	□□□□□ -1.98
SFM1	YOR021C	CYB2	P00175	591 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	ATR1	P13090	542 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
SFM1	YOR021C	CPR2	P23285	205 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	GYP6	P32806	458 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	REC114	P32841	428 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	PXA2	P34230	853 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	HEL1	P36113	551 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	PIM1	P36775	1133 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	PCA1	P38360	1216 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	LCB2	P40970	561 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	YJR011C	P47086	261 aa	Predicted RBP	2.65	□□□□□ -1.99
SFM1	YOR021C	YML6	P51998	286 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	FRE4	P53746	719 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	YMR130W	Q04223	302 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	DCS1	Q06151	350 aa		2.65	□□□□□ -1.99
SFM1	YOR021C	RKM1	Q08961	583 aa	Predicted RBP	2.65	□□□□□ -1.99
SFM1	YOR021C	CPR1	P14832	162 aa	Known RBP	2.64	□□□□□ -1.99
SFM1	YOR021C	CDC60	P26637	1090 aa	Known RBP	2.64	□□□□□ -1.99
SFM1	YOR021C	MMS4	P38257	691 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	YHR054C	P38780	354 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	EFM4	P40516	257 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	OGG1	P53397	376 aa	Predicted RBP	2.64	□□□□□ -1.99
SFM1	YOR021C	GOR1	P53839	350 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	OAZ1	Q02803	292 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	ODC1	Q03028	310 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	THP3	Q12049	470 aa	Known RBP	2.64	□□□□□ -1.99
SFM1	YOR021C	ORT1	Q12375	292 aa		2.64	□□□□□ -1.99
SFM1	YOR021C	SNU66	Q12420	587 aa	Predicted RBP	2.64	□□□□□ -1.99
SFM1	YOR021C	LPD1	P09624	499 aa	Known RBP	2.63	□□□□□ -1.99
SFM1	YOR021C	SPO7	P18410	259 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	LRP1	P38801	184 aa	Known RBP	2.63	□□□□□ -1.99
SFM1	YOR021C	YHR218W	P38899	603 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	LYS1	P38998	373 aa	RIP-Chip data	2.63	□□□□□ -1.99	not detected
SFM1	YOR021C	MKT1	P40850	830 aa	Known RBP	2.63	□□□□□ -1.99
SFM1	YOR021C	OST1	P41543	476 aa	Known RBP	2.63	□□□□□ -1.99
SFM1	YOR021C	PHO86	P46956	311 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	YJL132W	P47014	750 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	HMS2	P47175	358 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	YGR111W	P53265	400 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	RPT4	P53549	437 aa	Known RBP	2.63	□□□□□ -1.99
SFM1	YOR021C	GIP3	Q03016	1276 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	SNT309	Q06091	175 aa	Predicted RBP	2.63	□□□□□ -1.99
SFM1	YOR021C	UAF30	Q08747	228 aa		2.63	□□□□□ -1.99
SFM1	YOR021C	YPL199C	Q08954	240 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms