RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C UME6P39001 836 aa3.23□□□□□ -1.89
SHQ1YIL104C NDE1P40215 560 aa3.23□□□□□ -1.89
SHQ1YIL104C UBP6P43593 499 aaKnown RBP3.23□□□□□ -1.89
SHQ1YIL104C TEL2P53038 688 aa3.23□□□□□ -1.89
SHQ1YIL104C EFM5P53200 248 aaKnown RBP3.23□□□□□ -1.89
SHQ1YIL104C GTR2P53290 341 aa3.23□□□□□ -1.89
SHQ1YIL104C ARE2P53629 642 aaKnown RBP3.23□□□□□ -1.89
SHQ1YIL104C MRS2Q01926 470 aa3.23□□□□□ -1.89
SHQ1YIL104C YML122CQ03207 126 aa3.23□□□□□ -1.89
SHQ1YIL104C NHP10Q03435 203 aa3.23□□□□□ -1.89
SHQ1YIL104C FMN1Q03778 218 aa3.23□□□□□ -1.89
SHQ1YIL104C MTQ2Q03920 221 aaPredicted RBP3.23□□□□□ -1.89
SHQ1YIL104C BCH1Q05029 724 aa3.23□□□□□ -1.89
SHQ1YIL104C CDA1Q06702 301 aa3.23□□□□□ -1.89
SHQ1YIL104C YOL131WQ08270 108 aa3.23□□□□□ -1.89
SHQ1YIL104C RRP42Q12277 265 aaPredicted RBP3.23□□□□□ -1.89
SHQ1YIL104C YDR262WQ12331 272 aa3.23□□□□□ -1.89
SHQ1YIL104C JLP1Q12358 412 aa3.23□□□□□ -1.89
SHQ1YIL104C POL2P21951 2222 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C SEM1O94742 89 aa3.22□□□□□ -1.89
SHQ1YIL104C CYC1P00044 109 aaPredicted RBP3.22□□□□□ -1.89
SHQ1YIL104C COS2P0CX12 379 aa3.22□□□□□ -1.89
SHQ1YIL104C COS3P0CX13 379 aa3.22□□□□□ -1.89
SHQ1YIL104C HOP1P20050 605 aa3.22□□□□□ -1.89
SHQ1YIL104C SLM5P25345 492 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C CWP1P28319 239 aa3.22□□□□□ -1.89
SHQ1YIL104C RAD14P28519 371 aa3.22□□□□□ -1.89
SHQ1YIL104C CRM1P30822 1084 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C NIP1P32497 812 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C LOS1P33418 1100 aaPredicted RBP3.22□□□□□ -1.89
SHQ1YIL104C PTH2P34222 208 aa3.22□□□□□ -1.89
SHQ1YIL104C TSC10P38342 320 aa3.22□□□□□ -1.89
SHQ1YIL104C BZZ1P38822 633 aa3.22□□□□□ -1.89
SHQ1YIL104C ATG7P38862 630 aa3.22□□□□□ -1.89
SHQ1YIL104C MRX1P40050 688 aa3.22□□□□□ -1.89
SHQ1YIL104C SEC26P41810 973 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C COS4P43542 379 aa3.22□□□□□ -1.89
SHQ1YIL104C DUG1P43616 481 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C ALK1P43633 760 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C MRM2P53123 320 aa3.22□□□□□ -1.89
SHQ1YIL104C NOP19P53317 196 aaPredicted RBP3.22□□□□□ -1.89
SHQ1YIL104C CSL4P53859 292 aaPredicted RBP3.22□□□□□ -1.89
SHQ1YIL104C RNT1Q02555 471 aa3.22□□□□□ -1.89
SHQ1YIL104C EGD1Q02642 157 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C GIP3Q03016 1276 aa3.22□□□□□ -1.89
SHQ1YIL104C RRP45Q05636 305 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C BNA5Q05979 453 aa3.22□□□□□ -1.89
SHQ1YIL104C OMS1Q06668 471 aa3.22□□□□□ -1.89
SHQ1YIL104C BSC6Q08280 497 aa3.22□□□□□ -1.89
SHQ1YIL104C GUP2Q08929 609 aa3.22□□□□□ -1.89
SHQ1YIL104C DIN7Q12086 430 aa3.22□□□□□ -1.89
SHQ1YIL104C YPR011CQ12251 326 aa3.22□□□□□ -1.89
SHQ1YIL104C AHA1Q12449 350 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C RRP12Q12754 1228 aaKnown RBP3.22□□□□□ -1.89
SHQ1YIL104C SEN1Q00416 2231 aaKnown RBP3.21□□□□□ -1.89
SHQ1YIL104C CAR1P00812 333 aaKnown RBP3.21□□□□□ -1.9
SHQ1YIL104C ALG7P07286 448 aa3.21□□□□□ -1.9
SHQ1YIL104C RIP1P08067 215 aa3.21□□□□□ -1.9
SHQ1YIL104C CMP2P14747 604 aa3.21□□□□□ -1.9
SHQ1YIL104C PHO81P17442 1178 aa3.21□□□□□ -1.9
SHQ1YIL104C EXO70P19658 623 aa3.21□□□□□ -1.9
SHQ1YIL104C CDC10P25342 322 aaKnown RBP3.21□□□□□ -1.9
SHQ1YIL104C BUB3P26449 341 aa3.21□□□□□ -1.9
SHQ1YIL104C MVD1P32377 396 aaKnown RBP3.21□□□□□ -1.9
SHQ1YIL104C NTR2P36118 322 aaPredicted RBP3.21□□□□□ -1.9
SHQ1YIL104C YBL029WP38201 376 aa3.21□□□□□ -1.9
SHQ1YIL104C BMT2P38278 337 aa3.21□□□□□ -1.9
SHQ1YIL104C FTH1P38310 465 aa3.21□□□□□ -1.9
SHQ1YIL104C RFC3P38629 340 aa3.21□□□□□ -1.9
SHQ1YIL104C LEU5P38702 357 aa3.21□□□□□ -1.9
SHQ1YIL104C YER034WP40022 185 aaKnown RBP3.21□□□□□ -1.9
SHQ1YIL104C YEN1P40028 759 aa3.21□□□□□ -1.9
SHQ1YIL104C SCS2P40075 244 aaKnown RBP3.21□□□□□ -1.9
SHQ1YIL104C YIL152WP40455 235 aa3.21□□□□□ -1.9
SHQ1YIL104C APQ12P40532 138 aa3.21□□□□□ -1.9
SHQ1YIL104C MNT3P40549 630 aa3.21□□□□□ -1.9
SHQ1YIL104C FET5P43561 622 aa3.21□□□□□ -1.9
SHQ1YIL104C YJL049WP47048 450 aa3.21□□□□□ -1.9
SHQ1YIL104C NAS6P50086 228 aa3.21□□□□□ -1.9
SHQ1YIL104C SLI1P53304 468 aa3.21□□□□□ -1.9
SHQ1YIL104C YNL010WP53981 241 aaKnown RBP3.21□□□□□ -1.9
SHQ1YIL104C MET31Q03081 177 aa3.21□□□□□ -1.9
SHQ1YIL104C MSC1Q03104 513 aa3.21□□□□□ -1.9
SHQ1YIL104C VPS16Q03308 798 aa3.21□□□□□ -1.9
SHQ1YIL104C ROY1Q04847 553 aa3.21□□□□□ -1.9
SHQ1YIL104C OSW1Q08692 278 aa3.21□□□□□ -1.9
SHQ1YIL104C YOR114WQ12219 294 aa3.21□□□□□ -1.9
SHQ1YIL104C SKM1Q12469 655 aa3.21□□□□□ -1.9
SHQ1YIL104C YPR096CO13587 100 aa3.2□□□□□ -1.9
SHQ1YIL104C RAP1P11938 827 aa3.2□□□□□ -1.9
SHQ1YIL104C CLB1P24868 471 aa3.2□□□□□ -1.9
SHQ1YIL104C MEF1P25039 761 aa3.2□□□□□ -1.9
SHQ1YIL104C MXR2P25566 168 aa3.2□□□□□ -1.9
SHQ1YIL104C RPC19P28000 142 aaKnown RBP3.2□□□□□ -1.9
SHQ1YIL104C IDH2P28241 369 aaKnown RBP3.2□□□□□ -1.9
SHQ1YIL104C HEM3P28789 327 aa3.2□□□□□ -1.9
SHQ1YIL104C FUN30P31380 1131 aa3.2□□□□□ -1.9
SHQ1YIL104C ERG1P32476 496 aaKnown RBP3.2□□□□□ -1.9
SHQ1YIL104C RPT5P33297 434 aaKnown RBP3.2□□□□□ -1.9
SHQ1YIL104C CAF4P36130 643 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms