RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	MCP2	Q06567	569 aa		4.09	□□□□□ -1.75
DPB4	YDR121W	PSR1	Q07800	427 aa		4.09	□□□□□ -1.75
DPB4	YDR121W	HUA2	Q12134	243 aa		4.09	□□□□□ -1.75
DPB4	YDR121W	ATG9	Q12142	997 aa		4.09	□□□□□ -1.75
DPB4	YDR121W	YDR262W	Q12331	272 aa		4.09	□□□□□ -1.75
DPB4	YDR121W	AI5_ALPHA	Q9ZZX1	630 aa		4.09	□□□□□ -1.75
DPB4	YDR121W	RPP2A	P05319	106 aa	Known RBP	4.08	□□□□□ -1.76
DPB4	YDR121W	SEC53	P07283	254 aa	Known RBP	4.08	□□□□□ -1.76
DPB4	YDR121W	CYR1	P08678	2026 aa	Known RBP	4.08	□□□□□ -1.76
DPB4	YDR121W	VPS34	P22543	875 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	YSP3	P25036	478 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	ERG3	P32353	365 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	NPL6	P32832	435 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	YBL055C	P34220	418 aa	Predicted RBP	4.08	□□□□□ -1.76
DPB4	YDR121W	MRPL37	P36532	105 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	LSM5	P40089	93 aa	Known RBP	4.08	□□□□□ -1.76
DPB4	YDR121W	LRO1	P40345	661 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	ARF3	P40994	183 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
DPB4	YDR121W	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	ARC1	P46672	376 aa	Known RBP	4.08	□□□□□ -1.76
DPB4	YDR121W	JJJ1	P53863	590 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	ERG5	P54781	538 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	RAD30	Q04049	632 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	RCO1	Q04779	684 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	HOF1	Q05080	669 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	NRT1	Q08485	598 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	YLL056C	Q12177	298 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	RTN2	Q12443	393 aa		4.08	□□□□□ -1.76
DPB4	YDR121W	ATP2	P00830	511 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	CPA1	P07258	411 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	RPB2	P08518	1224 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	RPL43A	P0CX25	92 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	RPL43B	P0CX26	92 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	SEC12	P11655	471 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	PDX1	P16451	410 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	ROX1	P25042	368 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	PTP1	P25044	335 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	PHO84	P25297	587 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	CDC13	P32797	924 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	CYM1	P32898	989 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	IMP3	P32899	183 aa	Predicted RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	SKN1	P33336	771 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	COS111	P38308	924 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	YBP1	P38315	674 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	DIA4	P38705	446 aa	Predicted RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	STN1	P38960	494 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	YEL073C	P39974	107 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	TFG2	P41896	400 aa	Predicted RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	YML6	P51998	286 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	YAP6	Q03935	383 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	DIC1	Q06143	298 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	VAM6	Q07468	1049 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	AIM6	Q07716	390 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	DIA2	Q08496	732 aa	Predicted RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	BUD7	Q08754	746 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	YOR352W	Q08816	343 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	APL4	Q12028	832 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	YDR018C	Q12185	396 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	YDL177C	Q12257	170 aa		4.07	□□□□□ -1.76
DPB4	YDR121W	RRP12	Q12754	1228 aa	Known RBP	4.07	□□□□□ -1.76
DPB4	YDR121W	PMS1	P14242	873 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	YCK1	P23291	538 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	RAD57	P25301	460 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	LDB16	P25587	256 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	FEN2	P25621	512 aa	Known RBP	4.06	□□□□□ -1.76
DPB4	YDR121W	ORC2	P32833	620 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	TAF14	P35189	244 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	MIC60	P36112	540 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	MRPL10	P36520	322 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	LDB7	P38210	180 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	LYS1	P38998	373 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
DPB4	YDR121W	ARB1	P40024	610 aa	Known RBP	4.06	□□□□□ -1.76
DPB4	YDR121W	RGI2	P40188	164 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	FKH2	P41813	862 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	CHA4	P43634	648 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	YGL260W	P53056	76 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	YGR016W	P53209	190 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	SUR7	P54003	302 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	RHO3	Q00245	231 aa	Known RBP	4.06	□□□□□ -1.76
DPB4	YDR121W	FDC1	Q03034	503 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	CTK1	Q03957	528 aa	Known RBP	4.06	□□□□□ -1.76
DPB4	YDR121W	SOV1	Q04748	898 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
DPB4	YDR121W	PNS1	Q12412	539 aa		4.06	□□□□□ -1.76
DPB4	YDR121W	UTP20	P35194	2493 aa	Known RBP	4.06	□□□□□ -1.76
DPB4	YDR121W	YLR462W	O13556	202 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	IPP1	P00817	287 aa	Known RBP	4.05	□□□□□ -1.76
DPB4	YDR121W	VPS33	P20795	691 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	ERG8	P24521	451 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	NTH1	P32356	751 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	SEF1	P34228	1148 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	SRO77	P38163	1010 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	YBL029W	P38201	376 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	YHL049C	P38722	271 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	UBA4	P38820	440 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	YHR182W	P38870	785 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	FAU1	P40099	211 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	YFL064C	P43540	174 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	IDS2	P46958	469 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	KAP114	P53067	1004 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms