RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	AME1	P38313	324 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YHL041W	P38730	149 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	GPP2	P40106	250 aa	Known RBP	4.22	□□□□□ -1.73
SSB1	YDL229W	TGL3	P40308	642 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	UBP7	P40453	1071 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	MAD2	P40958	196 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	AGP3	P43548	558 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YJL043W	P47053	257 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	CLA4	P48562	842 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	GPG1	P53130	126 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	NPY1	P53164	384 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	DRN1	P53255	507 aa	Known RBP	4.22	□□□□□ -1.73
SSB1	YDL229W	GPI1	P53306	609 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YNL181W	P53878	407 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YNL115C	P53925	644 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	EBS1	Q03466	884 aa	Known RBP	4.22	□□□□□ -1.73
SSB1	YDL229W	ACL4	Q03771	387 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	PEX12	Q04370	399 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	MYO5	Q04439	1219 aa	Known RBP	4.22	□□□□□ -1.73
SSB1	YDL229W	ARG7	Q04728	441 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	CYK3	Q07533	885 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	THI73	Q07904	523 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YOR238W	Q08634	303 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	CWC2	Q12046	339 aa	Predicted RBP	4.22	□□□□□ -1.73
SSB1	YDL229W	APC9	Q12107	265 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	NSL1	Q12143	216 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YRR1	Q12172	810 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	HAL9	Q12180	1030 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	RAD59	Q12223	238 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	YOR214C	Q12282	236 aa		4.22	□□□□□ -1.73
SSB1	YDL229W	GAL10	P04397	699 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	RPL19A	P0CX82	189 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	RPL19B	P0CX83	189 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	MTF1	P14908	341 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	SEC18	P18759	758 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	CCA1	P21269	546 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ADE1	P27616	306 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	VMA5	P31412	392 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	THI4	P32318	326 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	SNU114	P36048	1008 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	MRPL3	P36516	390 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	NCL1	P38205	684 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	YBR071W	P38243	211 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	HSL7	P38274	827 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	TRM5	P38793	499 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	GDI1	P39958	451 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	YER085C	P40058	173 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	YER121W	P40076	114 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	NTA1	P40354	457 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	YIL089W	P40500	205 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	CHS6	P40955	746 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ERR3	P42222	437 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	YGR201C	P42936	225 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	OTU1	P43558	301 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	RMD8	P43620	662 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	PHO86	P46956	311 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	MRK1	P50873	501 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	PPT1	P53043	513 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SSB1	YDL229W	YPL068C	Q02749	293 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	YDR444W	Q04093	687 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	YDR109C	Q04585	715 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	CDC123	Q05791	360 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	NGL1	Q08213	363 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	YPR063C	Q12160	140 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SSB1	YDL229W	SVS1	Q12254	260 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	HER1	Q12276	1246 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	SFM1	Q12314	213 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	SUL2	Q12325	893 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	PFK27	Q12471	397 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	SKS1	Q12505	502 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	TIF6	Q12522	245 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	SAS5	Q99314	248 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	FSH3	Q99369	266 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ATP1	P07251	545 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	RPS6A	P0CX37	236 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	RPS6B	P0CX38	236 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	ZWF1	P11412	505 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	ATR1	P13090	542 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	HAP4	P14064	554 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	CBS1	P14066	229 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	SPO12	P17123	173 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	AIM17	P23180	465 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	MRM1	P25270	412 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	GPI10	P30777	616 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	LDS1	P31379	325 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ARO7	P32178	256 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ATP11	P32453	318 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	SPS19	P32573	292 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	STS1	P38637	319 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	EFM1	P38732	585 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	FAD1	P38913	306 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	YEL025C	P39991	1188 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ATF1	P40353	525 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	TIR3	P40552	269 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	OPT1	P40897	799 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	PFA3	P42836	336 aa		4.21	□□□□□ -1.74
SSB1	YDL229W	ARC1	P46672	376 aa	Known RBP	4.21	□□□□□ -1.74
SSB1	YDL229W	YAR1	P46683	200 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms