RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 JAKMIP1Q96N16 626 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
KCNMA1-229ENST00000638249 GOLGA8AA7E2F4 631 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 GOLGA8BA8MQT2 603 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 ZBTB43O43298 467 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 LAMC2Q13753 1193 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 DGKDQ16760 1214 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 RTN1Q16799 776 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
KCNMA1-229ENST00000638249 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 HAS3O00219 553 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 ICAM3P32942 547 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 APOBRQ0VD83 1088 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 NID2Q14112 1375 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 HIC1Q14526 733 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 TRIP12Q14669 1992 aaPredicted RBP17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 PSRC1Q6PGN9 363 aaPredicted RBP17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 Q6ZUG5 572 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 TET1Q8NFU7 2136 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 RBM28Q9NW13 759 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 PRUNE2Q8WUY3 3088 aa17.02■□□□□ 0.32
KCNMA1-229ENST00000638249 SPATA31C2B4DYI2 1134 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 SUPT20HL2P0C7V6 817 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 PSEN2P49810 448 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 PTPN11Q06124 597 aaPredicted RBP17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 SESTD1Q86VW0 696 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 BRF1Q92994 677 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 CUL5Q93034 780 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 ALG1Q9BT22 464 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 PSTPIP2Q9H939 334 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 HDAC6Q9UBN7 1215 aa17.02■□□□□ 0.31
KCNMA1-229ENST00000638249 PTPRSQ13332 1948 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 TGFB3P10600 412 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 DNAJB2P25686 324 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 PBX2P40425 430 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 MFSD10Q14728 455 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 KIAA0753Q2KHM9 967 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 ZNF697Q5TEC3 545 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 KCNV1Q6PIU1 500 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 OTOP2Q7RTS6 562 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 HERVK_113Q902F9 699 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 WNT8BQ93098 351 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 PGBD1Q96JS3 809 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 C16orf70Q9BSU1 422 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 GTF2IRD1Q9UHL9 959 aa17.01■□□□□ 0.31
KCNMA1-229ENST00000638249 STXBP3O00186 592 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 ADAMTS3O15072 1205 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 FIBPO43427 364 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 STAM2O75886 525 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 REC8O95072 547 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
KCNMA1-229ENST00000638249 ZNF200P98182 395 aaPredicted RBP17■□□□□ 0.31
KCNMA1-229ENST00000638249 PTGISQ16647 500 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 GNPTABQ3T906 1256 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 SEMA6BQ9H3T3 888 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
KCNMA1-229ENST00000638249 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
KCNMA1-229ENST00000638249 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 ATP9AO75110 1047 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 ITGB5P18084 799 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 RCAN1P53805 252 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 GPNMBQ14956 572 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 METTL7BQ6UX53 244 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 TRIM50Q86XT4 487 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 MLXIPQ9HAP2 919 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 PCDHA6Q9UN73 950 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 PCDHA8Q9Y5H6 950 aa16.99■□□□□ 0.31
KCNMA1-229ENST00000638249 A0A0C4DFX4 3053 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 PPFIA4O75335 1185 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 FGBP02675 491 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 LGALS2P05162 132 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 IQCF3P0C7M6 154 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 KCNA2P16389 499 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 NAPAP54920 295 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 GPR20Q99678 358 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 KATNAL1Q9BW62 490 aa16.98■□□□□ 0.31
KCNMA1-229ENST00000638249 NOD1Q9Y239 953 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms