RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 LAMC2Q13753 1193 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 KCNA10Q16322 511 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 LY6KQ17RY6 165 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 NIPA1Q7RTP0 329 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 CRYGNQ8WXF5 182 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
SNRPA-208ENST00000600456 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 SENP7Q9BQF6 1050 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 BRMS1Q9HCU9 246 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 JADE2Q9NQC1 790 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 KCNJ14Q9UNX9 436 aa15.76■□□□□ 0.11
SNRPA-208ENST00000600456 A0A1W2PQ45 241 aaPredicted RBP15.75■□□□□ 0.11
SNRPA-208ENST00000600456 A0A1W2PQY0 241 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 ADAMTS3O15072 1205 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 ASGR1P07306 291 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 UBA1P22314 1058 aaKnown RBP15.75■□□□□ 0.11
SNRPA-208ENST00000600456 NEDD9Q14511 834 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 CELF3Q5SZQ8 465 aaKnown RBP15.75■□□□□ 0.11
SNRPA-208ENST00000600456 KRT25Q7Z3Z0 450 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
SNRPA-208ENST00000600456 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
SNRPA-208ENST00000600456 RASGRP4Q8TDF6 673 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 COPS5Q92905 334 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 GLT1D1Q96MS3 346 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 MXRA8Q9BRK3 442 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 SENP6Q9GZR1 1112 aaPredicted RBP15.75■□□□□ 0.11
SNRPA-208ENST00000600456 POLR3EQ9NVU0 708 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
SNRPA-208ENST00000600456 KIAA1217Q5T5P2 1943 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 ELP1O95163 1332 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 MEIS1O00470 390 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 DTNBO60941 627 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 GGPS1O95749 300 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 PTGS1P23219 599 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 CIITAP33076 1130 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 ZNF76P36508 570 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 USP11P51784 963 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 IRX5P78411 483 aaPredicted RBP15.74■□□□□ 0.11
SNRPA-208ENST00000600456 BEX3Q00994 111 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 SEMA3FQ13275 785 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 C1orf53Q5VUE5 145 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 FAM184AQ8NB25 1140 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 PPTC7Q8NI37 304 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 GJB4Q9NTQ9 266 aa15.74■□□□□ 0.11
SNRPA-208ENST00000600456 MMP1P03956 469 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 KRT2P35908 639 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 SETQ01105 290 aaPredicted RBP15.73■□□□□ 0.11
SNRPA-208ENST00000600456 SP2Q02086 613 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNRPA-208ENST00000600456 MYSM1Q5VVJ2 828 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 METTL7BQ6UX53 244 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 AFG1LQ8WV93 481 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 C8orf76Q96K31 380 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 SEZ6LQ9BYH1 1024 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 MLXIPQ9HAP2 919 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 STARD7Q9NQZ5 370 aa15.73■□□□□ 0.11
SNRPA-208ENST00000600456 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.73■□□□□ 0.11
SNRPA-208ENST00000600456 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 MMP3P08254 477 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
SNRPA-208ENST00000600456 KCNA2P16389 499 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 CUL4AQ13619 759 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 SNX17Q15036 470 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 SAFBQ15424 915 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNRPA-208ENST00000600456 DGKDQ16760 1214 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 KRT40Q6A162 431 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 TBCKQ8TEA7 893 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 SPATA33Q96N06 139 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
SNRPA-208ENST00000600456 IGLV3-22A0A075B6J6 115 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 A0A0U1RQG5 324 aaPredicted RBP15.71■□□□□ 0.11
SNRPA-208ENST00000600456 FAM86B1E9PN63 330 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 FAM86B2P0C5J1 330 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 PURAQ00577 322 aaKnown RBP15.71■□□□□ 0.11
SNRPA-208ENST00000600456 MOXD1Q6UVY6 613 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 CXCL17Q6UXB2 119 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 DIS3L2Q8IYB7 885 aaKnown RBP15.71■□□□□ 0.11
SNRPA-208ENST00000600456 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 CYP2W1Q8TAV3 490 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 OXER1Q8TDS5 423 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 DPF3Q92784 378 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 SNX21Q969T3 373 aa15.71■□□□□ 0.11
SNRPA-208ENST00000600456 NAP1L4Q99733 375 aaKnown RBP15.71■□□□□ 0.11
SNRPA-208ENST00000600456 MTG1Q9BT17 334 aaPredicted RBP15.71■□□□□ 0.11
SNRPA-208ENST00000600456 AGO4Q9HCK5 861 aaKnown RBP15.71■□□□□ 0.11
SNRPA-208ENST00000600456 NFASCO94856 1347 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 NOP56O00567 594 aaKnown RBP15.7■□□□□ 0.1
SNRPA-208ENST00000600456 EVI5O60447 810 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 ATP9AO75110 1047 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 MYL3P08590 195 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
SNRPA-208ENST00000600456 LRRC26Q2I0M4 334 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 HSDL1Q3SXM5 330 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 CYFIP1Q7L576 1253 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 TNFRSF25Q93038 417 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms