RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 FGD4Q96M96 766 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 HEXIM2Q96MH2 286 aaKnown RBP7.27□□□□□ -1.25
SF3B3-214ENST00000572365 FANCLQ9NW38 375 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 GTF2IRD1Q9UHL9 959 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 PCDHB12Q9Y5F1 795 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 CACNA1SQ13698 1873 aa7.27□□□□□ -1.25
SF3B3-214ENST00000572365 MKI67P46013 3256 aaKnown RBP7.27□□□□□ -1.25
SF3B3-214ENST00000572365 DICER1Q9UPY3 1922 aaKnown RBP7.27□□□□□ -1.25
SF3B3-214ENST00000572365 AFDNP55196 1824 aaKnown RBP7.27□□□□□ -1.25
SF3B3-214ENST00000572365 SBNO2Q9Y2G9 1366 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 A0A1W2PQU0 124 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 CDC45O75419 566 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 CAPNS1P04632 268 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 ITGB2P05107 769 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 FAM153BP0C7A2 387 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 ZNF865P0CJ78 1059 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-214ENST00000572365 ITGA4P13612 1032 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 CYP27A1Q02318 531 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 CYP27C1Q4G0S4 372 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 HSP90AB2PQ58FF8 381 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 ZC3H12BQ5HYM0 836 aaKnown RBP7.26□□□□□ -1.25
SF3B3-214ENST00000572365 ZNF662Q6ZS27 426 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 DTWD2Q8NBA8 298 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 Q96M66 194 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 PRDM14Q9GZV8 571 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 TPSG1Q9NRR2 321 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 TMOD3Q9NYL9 352 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 PTCH2Q9Y6C5 1203 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 MON2Q7Z3U7 1717 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 NSD3Q9BZ95 1437 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 PASKQ96RG2 1323 aa7.26□□□□□ -1.25
SF3B3-214ENST00000572365 LRRN2O75325 713 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ITGAVP06756 1048 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ZNF445P59923 1031 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 MAP2K1Q02750 393 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-214ENST00000572365 SNW1Q13573 536 aaKnown RBP7.25□□□□□ -1.25
SF3B3-214ENST00000572365 TMEM67Q5HYA8 995 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ADAT2Q7Z6V5 191 aaKnown RBP7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ZNF227Q86WZ6 799 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 C2CD5Q86YS7 1000 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 SHISA5Q8N114 240 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 BVESQ8NE79 360 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ZSWIM2Q8NEG5 633 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ZNF622Q969S3 477 aaKnown RBP eCLIP7.25□□□□□ -1.25
SF3B3-214ENST00000572365 MFSD14AQ96MC6 490 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 GPR101Q96P66 508 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-214ENST00000572365 ARHGEF4Q9NR80 690 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 KCNH3Q9ULD8 1083 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 PCDH11XQ9BZA7 1347 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 PCDH11YQ9BZA8 1340 aa7.25□□□□□ -1.25
SF3B3-214ENST00000572365 FAM170BA6NMN3 283 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 RBAK-RBAKDNI3L0D1 243 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 RPS6KA4O75676 772 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 CLSTN1O94985 981 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 PLA2G4EQ3MJ16 856 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 ZNF765Q7L2R6 523 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 KIAA0907Q7Z7F0 614 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-214ENST00000572365 CNTROBQ8N137 903 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 SYNPOQ8N3V7 929 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 ARHGEF39Q8N4T4 335 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 TTLL6Q8N841 843 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 PIWIL2Q8TC59 973 aaKnown RBP7.24□□□□□ -1.25
SF3B3-214ENST00000572365 SYTL5Q8TDW5 730 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-214ENST00000572365 CAPNS2Q96L46 248 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 LRP2BPQ9P2M1 347 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 FBXL21Q9UKT6 434 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 EMC9Q9Y3B6 208 aa7.24□□□□□ -1.25
SF3B3-214ENST00000572365 SZT2Q5T011 3432 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 PRR33A8MZF0 331 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 POLRMTO00411 1230 aaKnown RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 CBX7O95931 251 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 F13BP05160 661 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 H2AFB1P0C5Y9 115 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 H2AFB2P0C5Z0 115 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 PPP2R2AP63151 447 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 NFIAQ12857 509 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 HSP90AA2PQ14568 343 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 NOL9Q5SY16 702 aaKnown RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 POMZP3Q6PJE2 187 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 HDGFL2Q7Z4V5 671 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 MFSD4AQ8N468 514 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 FBXL6Q8N531 539 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 COG3Q96JB2 828 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 DBNDD2Q9BQY9 259 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 TAF1DQ9H5J8 278 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 CGGBP1Q9UFW8 167 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
SF3B3-214ENST00000572365 SUGT1Q9Y2Z0 365 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 CAPN6Q9Y6Q1 641 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 CD163L1Q9NR16 1453 aa7.23□□□□□ -1.25
SF3B3-214ENST00000572365 KDM6AO15550 1401 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-214ENST00000572365 CCDC163A0A0D9SF12 145 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
SF3B3-214ENST00000572365 RASSF10A6NK89 507 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms