RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 ALG1Q9BT22 464 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
GCN1-208ENST00000551549 SLC12A7Q9Y666 1083 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 MYO9BQ13459 2157 aa11.24□□□□□ -0.61
GCN1-208ENST00000551549 MYH6P13533 1939 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 MEIS2O14770 477 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 CDC45O75419 566 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 F2P00734 622 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 CALM1P0DP23 149 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 CALM2P0DP24 149 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 CALM3P0DP25 149 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 HOXD8P13378 290 aaPredicted RBP11.23□□□□□ -0.61
GCN1-208ENST00000551549 RABGGTBP53611 331 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
GCN1-208ENST00000551549 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 BFSP2Q13515 415 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 KIAA0753Q2KHM9 967 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 TMTC3Q6ZXV5 915 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 MICU3Q86XE3 530 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 C7orf31Q8N865 590 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 MAFAQ8NHW3 353 aaPredicted RBP11.23□□□□□ -0.61
GCN1-208ENST00000551549 DHX38Q92620 1227 aaKnown RBP11.23□□□□□ -0.61
GCN1-208ENST00000551549 TCEANC2Q96MN5 208 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
GCN1-208ENST00000551549 NKX2-4Q9H2Z4 354 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 GTF2IRD1Q9UHL9 959 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 MSRAQ9UJ68 235 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 YBX2Q9Y2T7 364 aaKnown RBP11.23□□□□□ -0.61
GCN1-208ENST00000551549 TELO2Q9Y4R8 837 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 SLC4A7Q9Y6M7 1214 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 FRMPD4Q14CM0 1322 aa11.23□□□□□ -0.61
GCN1-208ENST00000551549 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 HAS3O00219 553 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 DLL1O00548 723 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 PPFIA4O75335 1185 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 PFKMP08237 780 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 TGFB3P10600 412 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 MYOGP15173 224 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 RFC2P35250 354 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
GCN1-208ENST00000551549 HIC1Q14526 733 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 GPNMBQ14956 572 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 ADCK5Q3MIX3 580 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 SMARCC2Q8TAQ2 1214 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 CUL5Q93034 780 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 INPP4AQ96PE3 977 aaPredicted RBP11.22□□□□□ -0.61
GCN1-208ENST00000551549 NEK1Q96PY6 1258 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 FTOQ9C0B1 505 aaKnown RBP eCLIP11.22□□□□□ -0.61
GCN1-208ENST00000551549 PSTPIP2Q9H939 334 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 MLXIPQ9HAP2 919 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
GCN1-208ENST00000551549 ATP2A2P16615 1042 aaKnown RBP11.21□□□□□ -0.61
GCN1-208ENST00000551549 ICAM3P32942 547 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 RAB30Q15771 203 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 UBE2SQ16763 222 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 GNPTABQ3T906 1256 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 PCNX4Q63HM2 1172 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 DHX32Q7L7V1 743 aaKnown RBP11.21□□□□□ -0.61
GCN1-208ENST00000551549 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.21□□□□□ -0.61
GCN1-208ENST00000551549 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 WNT8BQ93098 351 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 C16orf70Q9BSU1 422 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.61
GCN1-208ENST00000551549 KIAA1217Q5T5P2 1943 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 FIBPO43427 364 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 STAM2O75886 525 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 CKBP12277 381 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 ACTN1P12814 892 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 CPA1P15085 419 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 SELPP16109 830 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 TRIM71Q2Q1W2 868 aaKnown RBP11.2□□□□□ -0.62
GCN1-208ENST00000551549 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 SYNE3Q6ZMZ3 975 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 GPR20Q99678 358 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 PCDHA11Q9Y5I1 949 aa11.2□□□□□ -0.62
GCN1-208ENST00000551549 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 H3BRB1 525 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
GCN1-208ENST00000551549 ZBTB43O43298 467 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 NBNO60934 754 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 LGALS2P05162 132 aa11.19□□□□□ -0.62
GCN1-208ENST00000551549 ITGB5P18084 799 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms