RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 HP1BP3Q5SSJ5 553 aaPredicted RBP2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 TTC39BQ5VTQ0 682 aaPredicted RBP2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 OTOP2Q7RTS6 562 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 TTC5Q8N0Z6 440 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 TTC16Q8NEE8 873 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 GRAPLQ8TC17 118 aaPredicted RBP2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 TMC1Q8TDI8 760 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 FERMT2Q96AC1 680 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 MYRFLQ96LU7 910 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 TOX2Q96NM4 488 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 KCNF1Q9H3M0 494 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 MFSD1Q9H3U5 465 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 SLC52A2Q9HAB3 445 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 IL23AQ9NPF7 189 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 CTNNA3Q9UI47 895 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 USP18Q9UMW8 372 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 LEMD3Q9Y2U8 911 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 HEG1Q9ULI3 1381 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 ABCA2Q9BZC7 2435 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 PTPRQQ9UMZ3 2332 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 RALGAPA2Q2PPJ7 1873 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 SPG11Q96JI7 2443 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 CAPN8A6NHC0 703 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 FAM196BA6NMK8 535 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 LOC730098B7Z3J9 87 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 MBTPS2O43462 519 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 TGFB1P01137 390 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 PRB1P04280 392 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 PCSK2P16519 638 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 PTPRAP18433 802 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 SPINK2P20155 84 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 BRD2P25440 801 aaKnown RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 TARSP26639 723 aaKnown RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 ICAM3P32942 547 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 FAAP100Q0VG06 881 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 TNFAIP1Q13829 316 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 SETDB1Q15047 1291 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 PTPN21Q16825 1174 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 COL28A1Q2UY09 1125 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 HDGFL1Q5TGJ6 251 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 MFSD14CQ5VZR4 134 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 FASTKD5Q7L8L6 764 aaKnown RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 VSIG10LQ86VR7 867 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZDHHC13Q8IUH4 622 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 CCDC105Q8IYK2 499 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 CMTR1Q8N1G2 835 aaKnown RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 ANKRD13CQ8N6S4 541 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 DTWD2Q8NBA8 298 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 SUMF1Q8NBK3 374 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 TBC1D16Q8TBP0 767 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 IFT43Q96FT9 208 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZBED3Q96IU2 234 aaPredicted RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 FAM84BQ96KN1 310 aaPredicted RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 FAM83CQ9BQN1 747 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 C7orf69Q9H7B7 122 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZFYVE1Q9HBF4 777 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 OSGEPQ9NPF4 335 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 SEC31BQ9NQW1 1179 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZFATQ9P243 1243 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 DMGDHQ9UI17 866 aaKnown RBP2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 KIAA1024Q9UPX6 916 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 DAGLAQ9Y4D2 1042 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 FREM2Q5SZK8 3169 aa2.97□□□□□ -1.93
TRAV1-1-201ENST00000542354 RLFQ13129 1914 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 ZBTB42B2RXF5 422 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 CXCL11O14625 94 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 KINO60870 393 aaKnown RBP2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 EFCAB14O75071 495 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 MAFO75444 373 aaPredicted RBP2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 ALX3O95076 343 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 SCNN1AP37088 669 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 GPSM2P81274 684 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 CYP27A1Q02318 531 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 SMAD4Q13485 552 aaKnown RBP2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 CBX2Q14781 532 aaPredicted RBP2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 FAM110CQ1W6H9 321 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 SLC10A5Q5PT55 438 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 IL31Q6EBC2 164 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 BEND4Q6ZU67 534 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 ANKRD33Q7Z3H0 272 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 FAM20CQ8IXL6 584 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 UBALD2Q8IYN6 164 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 RPUSD2Q8IZ73 545 aaKnown RBP2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 RGL4Q8IZJ4 473 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 SOCS4Q8WXH5 440 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 OSBPL1AQ9BXW6 950 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 VRTNQ9H8Y1 702 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 CYP4F12Q9HCS2 524 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 RXFP3Q9NSD7 469 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 CLDND1Q9NY35 253 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 SLC45A1Q9Y2W3 748 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 SNCAIPQ9Y6H5 919 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 CEMIPQ8WUJ3 1361 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 COL12A1Q99715 3063 aa2.96□□□□□ -1.94
TRAV1-1-201ENST00000542354 TLN1Q9Y490 2541 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms