RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PLA2G4BP0C869 781 aa28.86■■■□□ 2.21
COL13A1-214ENST00000522165 NCAPH2Q6IBW4 605 aa28.86■■■□□ 2.21
COL13A1-214ENST00000522165 CENPPQ6IPU0 288 aa28.86■■■□□ 2.21
COL13A1-214ENST00000522165 GUF1Q8N442 669 aaKnown RBP28.86■■■□□ 2.21
COL13A1-214ENST00000522165 ERMNQ8TAM6 284 aa28.86■■■□□ 2.21
COL13A1-214ENST00000522165 SEMA6BQ9H3T3 888 aa28.86■■■□□ 2.21
COL13A1-214ENST00000522165 ZNF541Q9H0D2 1346 aa28.86■■■□□ 2.21
COL13A1-214ENST00000522165 KIF2AO00139 706 aaPredicted RBP28.85■■■□□ 2.21
COL13A1-214ENST00000522165 GTF2F1P35269 517 aaKnown RBP eCLIP28.85■■■□□ 2.21
COL13A1-214ENST00000522165 NLGN2Q8NFZ4 835 aa28.85■■■□□ 2.21
COL13A1-214ENST00000522165 BMP2KQ9NSY1 1161 aaPredicted RBP28.85■■■□□ 2.21
COL13A1-214ENST00000522165 VAV3Q9UKW4 847 aa28.85■■■□□ 2.21
COL13A1-214ENST00000522165 STK24Q9Y6E0 443 aa28.85■■■□□ 2.21
COL13A1-214ENST00000522165 LGALS16A8MUM7 142 aa28.85■■■□□ 2.21
COL13A1-214ENST00000522165 RIOK3O14730 519 aaKnown RBP28.85■■■□□ 2.21
COL13A1-214ENST00000522165 GYPCP04921 128 aa28.85■■■□□ 2.21
COL13A1-214ENST00000522165 CATSPER3Q86XQ3 398 aa28.85■■■□□ 2.21
COL13A1-214ENST00000522165 MFAP3LO75121 409 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 SSBP05455 408 aaKnown RBP eCLIP28.84■■■□□ 2.21
COL13A1-214ENST00000522165 RPA1P27694 616 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 UBXN1Q04323 297 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 CPLX3Q8WVH0 158 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 ICAM1P05362 532 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 CASP14P31944 242 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 COASYQ13057 564 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 NBPF12Q5TAG4 269 aaPredicted RBP28.84■■■□□ 2.21
COL13A1-214ENST00000522165 FAM114A1Q8IWE2 563 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 PRPF38AQ8NAV1 312 aaKnown RBP28.84■■■□□ 2.21
COL13A1-214ENST00000522165 SLF1Q9BQI6 1058 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 EHMT1Q9H9B1 1298 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 ZNF536O15090 1300 aa28.84■■■□□ 2.21
COL13A1-214ENST00000522165 POTEFA5A3E0 1075 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 DYNC1I1O14576 645 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 POTEIP0CG38 1075 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 SPATA31C1P0DKV0 1188 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 POTEGQ6S5H5 508 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 POTEEQ6S8J3 1075 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 ZNF507Q8TCN5 953 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 AGBL1Q96MI9 1066 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 WDR18Q9BV38 432 aa28.83■■■□□ 2.21
COL13A1-214ENST00000522165 GPBP1Q86WP2 473 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 CNGA4Q8IV77 575 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 ZNF592Q92610 1267 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 PANK4Q9NVE7 773 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 CCPG1Q9ULG6 757 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 TPM1P09493 284 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 FXR1P51114 621 aaKnown RBP eCLIP28.82■■■□□ 2.2
COL13A1-214ENST00000522165 SLC12A3P55017 1021 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 TRIM14Q14142 442 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 MB21D1Q8N884 522 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 CCDC51Q96ER9 411 aa28.82■■■□□ 2.2
COL13A1-214ENST00000522165 CNOT6LQ96LI5 555 aaKnown RBP28.82■■■□□ 2.2
COL13A1-214ENST00000522165 NAA15Q9BXJ9 866 aaKnown RBP28.82■■■□□ 2.2
COL13A1-214ENST00000522165 CYP11B2P19099 503 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 REXO1L1PQ8IX06 675 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 TUBGCP2Q9BSJ2 902 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 A0A1W2PQC6 194 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 ZSCAN12O43309 604 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 DCAF15Q66K64 600 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 EEF2KMTQ96G04 330 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 PPP2R2CQ9Y2T4 447 aa28.81■■■□□ 2.2
COL13A1-214ENST00000522165 DGKZQ13574 1117 aa28.8■■■□□ 2.2
COL13A1-214ENST00000522165 CCDC65Q8IXS2 484 aa28.8■■■□□ 2.2
COL13A1-214ENST00000522165 HSD17B4P51659 736 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 UBXN2AP68543 259 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 FAM26FQ5R3K3 315 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 GLIS3Q8NEA6 775 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 POLR3CQ9BUI4 534 aaPredicted RBP28.79■■■□□ 2.2
COL13A1-214ENST00000522165 DNM3Q9UQ16 869 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 TUBB4AP04350 444 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 PRKCSHP14314 528 aaPredicted RBP28.79■■■□□ 2.2
COL13A1-214ENST00000522165 FECHP22830 423 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 PSMC6P62333 389 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 LRRC63Q05C16 580 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 LRRC41Q15345 812 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 ARSHQ5FYA8 562 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 FOXR2Q6PJQ5 311 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 TOGARAM2Q6ZUX3 1019 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 SLC5A5Q92911 643 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 HOOK2Q96ED9 719 aa28.79■■■□□ 2.2
COL13A1-214ENST00000522165 PITPNM2Q9BZ72 1349 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 NPHP3-ACAD11A0A0J9YXS1 232 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 EML1O00423 815 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 DNM2P50570 870 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 MTMR2Q13614 643 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 CEP55Q53EZ4 464 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 MYOCDQ8IZQ8 938 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 KIF18AQ8NI77 898 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 EMILIN3Q9NT22 766 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 ZNF112Q9UJU3 913 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 PCDHA2Q9Y5H9 948 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 MEIS1O00470 390 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 PSMD10O75832 226 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 ANGEL2Q5VTE6 544 aaKnown RBP28.78■■■□□ 2.2
COL13A1-214ENST00000522165 OTOP1Q7RTM1 612 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 APOBEC3FQ8IUX4 373 aaKnown RBP28.78■■■□□ 2.2
COL13A1-214ENST00000522165 CLEC4DQ8WXI8 215 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 EIF2AK1Q9BQI3 630 aaKnown RBP28.78■■■□□ 2.2
COL13A1-214ENST00000522165 TANGO6Q9C0B7 1094 aa28.78■■■□□ 2.2
COL13A1-214ENST00000522165 SLC38A10Q9HBR0 1119 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms