RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 HGSO14964 777 aaPredicted RBP8.25□□□□□ -1.09
NUP54-209ENST00000510569 ADRB1P08588 477 aa8.25□□□□□ -1.09
NUP54-209ENST00000510569 GRIA2P42262 883 aa8.25□□□□□ -1.09
NUP54-209ENST00000510569 DDR2Q16832 855 aa8.25□□□□□ -1.09
NUP54-209ENST00000510569 CELF2-AS1Q8N7Q2 184 aa8.25□□□□□ -1.09
NUP54-209ENST00000510569 CDIP1Q9H305 208 aa8.25□□□□□ -1.09
NUP54-209ENST00000510569 EPB41L1Q9H4G0 881 aa8.25□□□□□ -1.09
NUP54-209ENST00000510569 A0A1W2PQU0 124 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 TADA3O75528 432 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 DNAJA1P31689 397 aaKnown RBP8.24□□□□□ -1.09
NUP54-209ENST00000510569 STAT5AP42229 794 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 ADAM9Q13443 819 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 STEAP3Q658P3 488 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 DBX2Q6ZNG2 339 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 KCTD13Q8WZ19 329 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 ZNF428Q96B54 188 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 CLDND1Q9NY35 253 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 JAG2Q9Y219 1238 aa8.24□□□□□ -1.09
NUP54-209ENST00000510569 TCRBV5S2A0A599 114 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 K7ESM1 405 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 NKX3-2P78367 333 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 RGL3Q3MIN7 710 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP54-209ENST00000510569 DDX1Q92499 740 aaKnown RBP8.23□□□□□ -1.09
NUP54-209ENST00000510569 SGSM3Q96HU1 749 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 GPR27Q9NS67 375 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 DTLQ9NZJ0 730 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 PCDHB4Q9Y5E5 795 aa8.23□□□□□ -1.09
NUP54-209ENST00000510569 KLF4O43474 513 aa8.22□□□□□ -1.09
NUP54-209ENST00000510569 ANKS3Q6ZW76 656 aa8.22□□□□□ -1.09
NUP54-209ENST00000510569 ARRDC4Q8NCT1 418 aa8.22□□□□□ -1.09
NUP54-209ENST00000510569 PHOSPHO1Q8TCT1 267 aa8.22□□□□□ -1.09
NUP54-209ENST00000510569 YIPF4Q9BSR8 244 aa8.22□□□□□ -1.09
NUP54-209ENST00000510569 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
NUP54-209ENST00000510569 R3HCC1Q9Y3T6 440 aaKnown RBP8.22□□□□□ -1.09
NUP54-209ENST00000510569 DLX3O60479 287 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 DGKIO75912 1065 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 ITGB3P05106 788 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 CYP4F22Q6NT55 531 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 STK32CQ86UX6 486 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 TOE1Q96GM8 510 aaKnown RBP8.21□□□□□ -1.1
NUP54-209ENST00000510569 CHAMP1Q96JM3 812 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 RBM15Q96T37 977 aaKnown RBP eCLIP8.21□□□□□ -1.1
NUP54-209ENST00000510569 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.1
NUP54-209ENST00000510569 ZNF28P17035 718 aa8.2□□□□□ -1.1
NUP54-209ENST00000510569 TEPPQ6URK8 271 aa8.2□□□□□ -1.1
NUP54-209ENST00000510569 HHIPL2Q6UWX4 724 aa8.2□□□□□ -1.1
NUP54-209ENST00000510569 RSPO2Q6UXX9 243 aaPredicted RBP8.2□□□□□ -1.1
NUP54-209ENST00000510569 BORCS6Q96GS4 357 aa8.2□□□□□ -1.1
NUP54-209ENST00000510569 ST7Q9NRC1 585 aa8.2□□□□□ -1.1
NUP54-209ENST00000510569 HSPBP1Q9NZL4 362 aa8.2□□□□□ -1.1
NUP54-209ENST00000510569 KIAA2012Q0VF49 1180 aa8.19□□□□□ -1.1
NUP54-209ENST00000510569 HSP90AA2PQ14568 343 aaPredicted RBP8.19□□□□□ -1.1
NUP54-209ENST00000510569 TXNDC5Q8NBS9 432 aaKnown RBP8.19□□□□□ -1.1
NUP54-209ENST00000510569 SMOC1Q9H4F8 434 aa8.19□□□□□ -1.1
NUP54-209ENST00000510569 MYOTQ9UBF9 498 aa8.19□□□□□ -1.1
NUP54-209ENST00000510569 IQCA1LA6NCM1 817 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 MROH6A6NGR9 719 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 C9orf118A6NHY6 69 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 MSCO60682 206 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 FGFR1P11362 822 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 LGI4Q8N135 537 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 ST13P5Q8NFI4 369 aaPredicted RBP8.18□□□□□ -1.1
NUP54-209ENST00000510569 TTLL11Q8NHH1 800 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 AARSD1Q9BTE6 412 aaKnown RBP8.18□□□□□ -1.1
NUP54-209ENST00000510569 PHF20Q9BVI0 1012 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 ARHGEF4Q9NR80 690 aa8.18□□□□□ -1.1
NUP54-209ENST00000510569 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.16e-11■□□□□ 8.2
NUP54-209ENST00000510569 MAFKO60675 156 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 PLATP00750 562 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 LRG1P02750 347 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 MCTP2Q6DN12 878 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 BORAQ6PGQ7 559 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 GGNQ86UU5 652 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 FAM124AQ86V42 546 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 SLC6A20Q9NP91 592 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 ASH2LQ9UBL3 628 aa8.17□□□□□ -1.1
NUP54-209ENST00000510569 KRIT1O00522 736 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 RAB33AQ14088 237 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 ZNF827Q17R98 1081 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 TBC1D10BQ4KMP7 808 aaPredicted RBP8.16□□□□□ -1.1
NUP54-209ENST00000510569 USP53Q70EK8 1073 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 DCAF4Q8WV16 495 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 OSBP2Q969R2 916 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 LCORQ96JN0 433 aaPredicted RBP8.16□□□□□ -1.1
NUP54-209ENST00000510569 CLIC6Q96NY7 704 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 WRNIP1Q96S55 665 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 TMEM209Q96SK2 561 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 PPARGC1AQ9UBK2 798 aaKnown RBP8.16□□□□□ -1.1
NUP54-209ENST00000510569 WASF3Q9UPY6 502 aa8.16□□□□□ -1.1
NUP54-209ENST00000510569 MAGEA10P43363 369 aaPredicted RBP8.15□□□□□ -1.1
NUP54-209ENST00000510569 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
NUP54-209ENST00000510569 YTHDC1Q96MU7 727 aaKnown RBP8.15□□□□□ -1.1
NUP54-209ENST00000510569 ZFYVE21Q9BQ24 234 aa8.15□□□□□ -1.1
NUP54-209ENST00000510569 INVSQ9Y283 1065 aa8.15□□□□□ -1.1
NUP54-209ENST00000510569 NTRK3Q16288 839 aa8.14□□□□□ -1.11
NUP54-209ENST00000510569 PRAMEF18Q5VWM3 479 aa8.14□□□□□ -1.11
NUP54-209ENST00000510569 TRIM48Q8IWZ4 208 aa8.14□□□□□ -1.11
NUP54-209ENST00000510569 TTC9BQ8N6N2 239 aa8.14□□□□□ -1.11
NUP54-209ENST00000510569 PIP4K2CQ8TBX8 421 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms