RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RIN2Q8WYP3 895 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 MTA3Q9BTC8 594 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 FBXO2Q9UK22 296 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 KLRF2D3W0D1 207 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 H7C1W4 665 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 PALMO75781 387 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 MDH1P40925 334 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 ANKRD35Q8N283 1001 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 FAM133AQ8N9E0 248 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 PNKPQ96T60 521 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 LRRC1Q9BTT6 524 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 SUGCTQ9HAC7 445 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 PALLDQ8WX93 1383 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 CFAP73A6NFT4 308 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 ALDH1B1P30837 517 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 GUCY1A3Q02108 690 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 WDR44Q5JSH3 913 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 LGSNQ5TDP6 509 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 SCOCQ9UIL1 159 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 ARMC2Q8NEN0 867 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 ZNF473Q8WTR7 871 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 TAF1DQ9H5J8 278 aaPredicted RBP18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 SLC24A3Q9HC58 644 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 VCX3AQ9NNX9 186 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 TRIM49BA6NDI0 452 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 NOL3O60936 208 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 PPP1R21Q6ZMI0 780 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 CCT8L2Q96SF2 557 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 STRBPQ96SI9 672 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 JAG2Q9Y219 1238 aa18.75■□□□□ 0.59
HMGXB3-201ENST00000502717 AP1M1Q9BXS5 423 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 TXNDC16Q9P2K2 825 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 ANAPC4Q9UJX5 808 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 CTDNEP1O95476 244 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 SKIP12755 728 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 BCAMP50895 628 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 GREM2Q9H772 168 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 PICK1Q9NRD5 415 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 CLTCQ00610 1675 aaKnown RBP18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 H3BQF6 201 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 TXNDC9O14530 226 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 ATF2P15336 505 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 PLCG1P19174 1290 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 MAN1A1P33908 653 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 SGMS1Q86VZ5 419 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 TSC22D3Q99576 134 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 MAGOHP61326 146 aaKnown RBP18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 DR1Q01658 176 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 CHP1Q99653 195 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 LY9Q9HBG7 655 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 AGTPBP1Q9UPW5 1226 aa18.74■□□□□ 0.59
HMGXB3-201ENST00000502717 BRDTQ58F21 947 aaPredicted RBP18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 RAB3IL1Q8TBN0 382 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 ADAMTS1Q9UHI8 967 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 ZNF609O15014 1411 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 BATF3Q9NR55 127 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 ZRANB2O95218 330 aaKnown RBP eCLIP18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 RASGRP4Q8TDF6 673 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 PIK3C2BO00750 1634 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 AFPP02771 609 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 FDPSP14324 419 aaKnown RBP18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 STRN3Q13033 797 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 CHMP6Q96FZ7 201 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 HEG1Q9ULI3 1381 aa18.73■□□□□ 0.59
HMGXB3-201ENST00000502717 ESYT3A0FGR9 886 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 UFL1O94874 794 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 NR2F2P24468 414 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 MYO1EQ12965 1108 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 ZNF446Q9NWS9 450 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 GGA1Q9UJY5 639 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 IVNS1ABPQ9Y6Y0 642 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 ARHGEF35A5YM69 484 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 PHBP35232 272 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 ARHGEF6Q15052 776 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 ASAP1Q9ULH1 1129 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 CCDC93Q567U6 631 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 PRKAB2O43741 272 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 SDCCAG8Q86SQ7 713 aaPredicted RBP18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 CEP72Q9P209 647 aa18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 DIS3Q9Y2L1 958 aaKnown RBP18.72■□□□□ 0.59
HMGXB3-201ENST00000502717 LRRC53A6NM62 1247 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 OPHN1O60890 802 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 LSP1P33241 339 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 SLCO1A2P46721 670 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 ALKBH5Q6P6C2 394 aaKnown RBP18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 EXOC7Q9UPT5 735 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms