RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 MPOP05164 745 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 GLI1P08151 1106 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 DBHP09172 617 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 COL6A2P12110 1019 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 SDHBP21912 280 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 CRY1Q16526 586 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 HABP4Q5JVS0 413 aaKnown RBP6.81□□□□□ -1.32
VPS36-206ENST00000497149 PAQR3Q6TCH7 311 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 OVCH1Q7RTY7 1134 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 OSTM1Q86WC4 334 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 ZSWIM9Q86XI8 627 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 ANKLE2Q86XL3 938 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 NETO2Q8NC67 525 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 INTS4Q96HW7 963 aaKnown RBP6.81□□□□□ -1.32
VPS36-206ENST00000497149 SLC6A20Q9NP91 592 aa6.81□□□□□ -1.32
VPS36-206ENST00000497149 NKRFO15226 690 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS36-206ENST00000497149 KPNA6O60684 536 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 PAPLNO95428 1278 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 PDE6AP16499 860 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 ITGB5P18084 799 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 SOX5P35711 763 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 SLC6A11P48066 632 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 LACTBP83111 547 aaPredicted RBP6.8□□□□□ -1.32
VPS36-206ENST00000497149 KCNMB1Q16558 191 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 PTPROQ16827 1216 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 TMEM177Q53S58 311 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 ADGRF1Q5T601 910 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 UBR7Q8N806 425 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 PIP4K2CQ8TBX8 421 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 PANK1Q8TE04 598 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 ORAI3Q9BRQ5 295 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 SLC6A17Q9H1V8 727 aa6.8□□□□□ -1.32
VPS36-206ENST00000497149 ZC3H12DA2A288 527 aaKnown RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 F8W031 263 aaPredicted RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 M0R2C6 588 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 CBX4O00257 560 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 TRAF5O00463 557 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 KRIT1O00522 736 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 HGSO14964 777 aaPredicted RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 AMY2AP04746 511 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 AMY2BP19961 511 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 NR1I3Q14994 352 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 GPR19Q15760 415 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 CHRNA2Q15822 529 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 STEAP3Q658P3 488 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 PKN3Q6P5Z2 889 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 ARHGAP36Q6ZRI8 547 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 KIF18BQ86Y91 864 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 DCP2Q8IU60 420 aaKnown RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 ZCRB1Q8TBF4 217 aaKnown RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 LEO1Q8WVC0 666 aaPredicted RBP6.79□□□□□ -1.32
VPS36-206ENST00000497149 SEC14L1Q92503 715 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 PEX11GQ96HA9 241 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 GPATCH3Q96I76 525 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 RXFP1Q9HBX9 757 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 SIT1Q9Y3P8 196 aa6.79□□□□□ -1.32
VPS36-206ENST00000497149 TCRBV5S4A2TA0A5A2 114 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 OR14I1A6ND48 311 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 BTBD11A6QL63 1104 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 NUDT19A8MXV4 375 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 ZNF561-AS1K7EIQ3 104 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 SGSM2O43147 1006 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 TADA3O75528 432 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 JUNBP17275 347 aaPredicted RBP6.78□□□□□ -1.32
VPS36-206ENST00000497149 TAL1P17542 331 aaPredicted RBP6.78□□□□□ -1.32
VPS36-206ENST00000497149 CNGA1P29973 690 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 PDE6BP35913 854 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 JAM2P57087 298 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 RAB3GAP1Q15042 981 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 SEPT7Q16181 437 aaKnown RBP6.78□□□□□ -1.32
VPS36-206ENST00000497149 EMC4Q5J8M3 183 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 RPTNQ6XPR3 784 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 DDX46Q7L014 1031 aaKnown RBP6.78□□□□□ -1.32
VPS36-206ENST00000497149 CISD2Q8N5K1 135 aaKnown RBP6.78□□□□□ -1.32
VPS36-206ENST00000497149 BRINP2Q9C0B6 783 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 AP5M1Q9H0R1 490 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 PCDH12Q9NPG4 1184 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 KLHL14Q9P2G3 628 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 NUDT5Q9UKK9 219 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 DSEQ9UL01 958 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 COL4A3BPQ9Y5P4 624 aa6.78□□□□□ -1.32
VPS36-206ENST00000497149 ZNF503-AS2A6NEH8 195 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 MAFKO60675 156 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 KRT15P19012 456 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 AMPD3Q01432 767 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
VPS36-206ENST00000497149 CYP4F22Q6NT55 531 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 IRF2BP1Q8IU81 584 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 C2orf69Q8N8R5 385 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 CHST14Q8NCH0 376 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 UHMK1Q8TAS1 419 aaKnown RBP6.77□□□□□ -1.33
VPS36-206ENST00000497149 SH3RF2Q8TEC5 729 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 FAM168AQ92567 244 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 SMOC1Q9H4F8 434 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 SMURF1Q9HCE7 757 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 CABP5Q9NP86 173 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 DBR1Q9UK59 544 aaKnown RBP6.77□□□□□ -1.33
VPS36-206ENST00000497149 PALD1Q9ULE6 856 aa6.77□□□□□ -1.33
VPS36-206ENST00000497149 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms