RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 NCKAP1LP55160 1127 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 FNDC3BQ53EP0 1204 aaKnown RBP10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 CYP4F22Q6NT55 531 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 OTOP3Q7RTS5 596 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 BRAPQ7Z569 592 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 PIP4K2CQ8TBX8 421 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 APPBP2Q92624 585 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 SIGLEC10Q96LC7 697 aa10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 MAGEB10Q96LZ2 347 aaPredicted RBP10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 SMG5Q9UPR3 1016 aaKnown RBP10.55□□□□□ -0.72
HMGB3P14-201ENST00000494195 RAPGEF3O95398 923 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 ASMTLO95671 621 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 GNAT1P11488 350 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 AMIGO3Q86WK7 504 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 SMOC1Q9H4F8 434 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 TRIM39Q9HCM9 518 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 FANCLQ9NW38 375 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
HMGB3P14-201ENST00000494195 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 BUB1BO60566 1050 aaPredicted RBP10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 HABP4Q5JVS0 413 aaKnown RBP10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 PHOSPHO1Q8TCT1 267 aa10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 CPA5Q8WXQ8 436 aa10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 SCLYQ96I15 445 aa10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 IRAK3Q9Y616 596 aa10.53□□□□□ -0.72
HMGB3P14-201ENST00000494195 RASGRP1O95267 797 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 COL6A2P12110 1019 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 TCEA2Q15560 299 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 C16orf86Q6ZW13 317 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 ANKLE2Q86XL3 938 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 MIB1Q86YT6 1006 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 ZC3H7AQ8IWR0 971 aaKnown RBP10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 FBXW5Q969U6 566 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 MYOTQ9UBF9 498 aa10.52□□□□□ -0.73
HMGB3P14-201ENST00000494195 TCRBV5S2A0A599 114 aa10.51□□□□□ -0.73
HMGB3P14-201ENST00000494195 CDC45O75419 566 aa10.51□□□□□ -0.73
HMGB3P14-201ENST00000494195 KCNA10Q16322 511 aa10.51□□□□□ -0.73
HMGB3P14-201ENST00000494195 ETV3LQ6ZN32 361 aa10.51□□□□□ -0.73
HMGB3P14-201ENST00000494195 CNOT6Q9ULM6 557 aaKnown RBP10.51□□□□□ -0.73
HMGB3P14-201ENST00000494195 NUB1Q9Y5A7 615 aa10.51□□□□□ -0.73
HMGB3P14-201ENST00000494195 GSTA4O15217 222 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 RFPL3O75679 317 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 SRGAP2CP0DJJ0 459 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 ATF2P15336 505 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 LINC00310P59036 64 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 GIMAP6Q6P9H5 292 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 C16orf59Q7L2K0 433 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 FGD2Q7Z6J4 655 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 FAM126BQ8IXS8 530 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 UHMK1Q8TAS1 419 aaKnown RBP10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 ASH2LQ9UBL3 628 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 FAN1Q9Y2M0 1017 aa10.5□□□□□ -0.73
HMGB3P14-201ENST00000494195 TCRBV16S1A1N1A0A5B0 115 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 TLDC2A0PJX2 215 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 MC3RP41968 323 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 ST5P78524 1137 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 CACNB2Q08289 660 aaPredicted RBP10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 SSPNQ14714 243 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 FAM47CQ5HY64 1035 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 TRIM48Q8IWZ4 208 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 ARRDC4Q8NCT1 418 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 GOLGA2P5Q9HBQ8 144 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 CATSPERZQ9NTU4 200 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 TMA7Q9Y2S6 64 aaKnown RBP10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 KCTD3Q9Y597 815 aa10.49□□□□□ -0.73
HMGB3P14-201ENST00000494195 RFXAPO00287 272 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 ENPP3O14638 875 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 PYGMP11217 842 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 B3GNT8Q7Z7M8 397 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 TMEFF1Q8IYR6 380 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 PANK1Q8TE04 598 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 YIPF4Q9BSR8 244 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 DSEQ9UL01 958 aa10.48□□□□□ -0.73
HMGB3P14-201ENST00000494195 SLC27A2O14975 620 aa10.47□□□□□ -0.73
HMGB3P14-201ENST00000494195 PI3P19957 117 aa10.47□□□□□ -0.73
HMGB3P14-201ENST00000494195 PABPC4Q13310 644 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGB3P14-201ENST00000494195 ZNF385BQ569K4 471 aa10.47□□□□□ -0.73
HMGB3P14-201ENST00000494195 CBLCQ9ULV8 474 aa10.47□□□□□ -0.73
HMGB3P14-201ENST00000494195 CD2APQ9Y5K6 639 aa10.47□□□□□ -0.73
HMGB3P14-201ENST00000494195 CCDC66A2RUB6 948 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 DBX1A6NMT0 343 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 CKMP06732 381 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 LIMS1P48059 325 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 FOXO4P98177 505 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 GPR19Q15760 415 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 ZC3H18Q86VM9 953 aaKnown RBP10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 FAM129CQ86XR2 697 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 CILP2Q8IUL8 1156 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 NLGN1Q8N2Q7 840 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 TTLL11Q8NHH1 800 aa10.46□□□□□ -0.73
HMGB3P14-201ENST00000494195 CELF4Q9BZC1 486 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms