RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 CELF4Q9BZC1 486 aaKnown RBP5.6□□□□□ -1.51
CD46-216ENST00000490278 CATSPERZQ9NTU4 200 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 SAMD15Q9P1V8 674 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 COQ6Q9Y2Z9 468 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 FAM83GA6ND36 823 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 KRIT1O00522 736 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 KPNA6O60684 536 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 VIL1P09327 827 aaKnown RBP5.59□□□□□ -1.51
CD46-216ENST00000490278 JUNBP17275 347 aaPredicted RBP5.59□□□□□ -1.51
CD46-216ENST00000490278 SDHBP21912 280 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 PDE6BP35913 854 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 STAT3P40763 770 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 SLC6A11P48066 632 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 IRAK1P51617 712 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 NR1I3Q14994 352 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 CRY1Q16526 586 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 PIK3R6Q5UE93 754 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 CDCA2Q69YH5 1023 aaPredicted RBP5.59□□□□□ -1.51
CD46-216ENST00000490278 OTOP3Q7RTS5 596 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 KRT26Q7Z3Y9 468 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 ANKLE2Q86XL3 938 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 IRF2BP1Q8IU81 584 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.59□□□□□ -1.51
CD46-216ENST00000490278 CHAC2Q8WUX2 184 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 SEC14L1Q92503 715 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 WNK4Q96J92 1243 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 AP5M1Q9H0R1 490 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 CAAP1Q9H8G2 361 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 NUDT5Q9UKK9 219 aa5.59□□□□□ -1.51
CD46-216ENST00000490278 ARID1BQ8NFD5 2236 aaPredicted RBP5.58□□□□□ -1.52
CD46-216ENST00000490278 ZC3H12DA2A288 527 aaKnown RBP5.58□□□□□ -1.52
CD46-216ENST00000490278 OR14I1A6ND48 311 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 NUDT19A8MXV4 375 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 M0R2C6 588 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 MAFKO60675 156 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 GLRX3O76003 335 aaKnown RBP5.58□□□□□ -1.52
CD46-216ENST00000490278 COL6A2P12110 1019 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 SOX5P35711 763 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 RAB3GAP1Q15042 981 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 GPR19Q15760 415 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 CHRNA2Q15822 529 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 TMEM177Q53S58 311 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 EMC4Q5J8M3 183 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 HABP4Q5JVS0 413 aaKnown RBP5.58□□□□□ -1.52
CD46-216ENST00000490278 STEAP3Q658P3 488 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 OVCH1Q7RTY7 1134 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 RNF180Q86T96 592 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 PIP4K2CQ8TBX8 421 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 PEX11GQ96HA9 241 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 MTFR1LQ9H019 292 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 SLC6A20Q9NP91 592 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 DBR1Q9UK59 544 aaKnown RBP5.58□□□□□ -1.52
CD46-216ENST00000490278 CBLCQ9ULV8 474 aa5.58□□□□□ -1.52
CD46-216ENST00000490278 F8W031 263 aaPredicted RBP5.57□□□□□ -1.52
CD46-216ENST00000490278 HGSO14964 777 aaPredicted RBP5.57□□□□□ -1.52
CD46-216ENST00000490278 NKRFO15226 690 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD46-216ENST00000490278 PDE6AP16499 860 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 CNGA1P29973 690 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 LACTBP83111 547 aaPredicted RBP5.57□□□□□ -1.52
CD46-216ENST00000490278 TMEM62Q0P6H9 643 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 FZD5Q13467 585 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 PCBP1Q15365 356 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD46-216ENST00000490278 PKN3Q6P5Z2 889 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 RPTNQ6XPR3 784 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 OSTM1Q86WC4 334 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 CISD2Q8N5K1 135 aaKnown RBP5.57□□□□□ -1.52
CD46-216ENST00000490278 FAM168AQ92567 244 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 ORAI3Q9BRQ5 295 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 RXFP1Q9HBX9 757 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 CABP5Q9NP86 173 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 SIT1Q9Y3P8 196 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 NUB1Q9Y5A7 615 aa5.57□□□□□ -1.52
CD46-216ENST00000490278 ZNF503-AS2A6NEH8 195 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 ZNF561-AS1K7EIQ3 104 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 CBX4O00257 560 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 ABLIM1O14639 778 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 SGSM2O43147 1006 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 TADA3O75528 432 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 ZBTB7AO95365 584 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 KRT15P19012 456 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 MAPKAPK2P49137 400 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 SLC9A5Q14940 896 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 PTPROQ16827 1216 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 CT47A1Q5JQC4 288 aaPredicted RBP5.56□□□□□ -1.52
CD46-216ENST00000490278 CYP4F22Q6NT55 531 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 MPZL3Q6UWV2 235 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 ARHGAP36Q6ZRI8 547 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
CD46-216ENST00000490278 KIF18BQ86Y91 864 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 UBR7Q8N806 425 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 C2orf69Q8N8R5 385 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 UHMK1Q8TAS1 419 aaKnown RBP5.56□□□□□ -1.52
CD46-216ENST00000490278 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
CD46-216ENST00000490278 LEO1Q8WVC0 666 aaPredicted RBP5.56□□□□□ -1.52
CD46-216ENST00000490278 SMOC1Q9H4F8 434 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 KLHL14Q9P2G3 628 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 DSEQ9UL01 958 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 PALD1Q9ULE6 856 aa5.56□□□□□ -1.52
CD46-216ENST00000490278 ZNF652Q9Y2D9 606 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms