RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 DNAH12Q6ZR08 3092 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 GTPBP6O43824 516 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-226ENST00000486021 GGPS1O95749 300 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 IQCF3P0C7M6 154 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 SELPP16109 830 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 ITGB8P26012 769 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 ICAM3P32942 547 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 PSEN2P49810 448 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 ARHGAP1Q07960 439 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 MFSD10Q14728 455 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 MYSM1Q5VVJ2 828 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 PPP1R18Q6NYC8 613 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 DHX32Q7L7V1 743 aaKnown RBP8.59□□□□□ -1.03
CPNE1-226ENST00000486021 RSPH3Q86UC2 560 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 SGMS1Q86VZ5 419 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 MAFAQ8NHW3 353 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-226ENST00000486021 TBC1D5Q92609 795 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 GPRASP2Q96D09 838 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 FAM161BQ96MY7 647 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 CDX2Q99626 313 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-226ENST00000486021 LSG1Q9H089 658 aaKnown RBP8.59□□□□□ -1.03
CPNE1-226ENST00000486021 TRPV6Q9H1D0 765 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-226ENST00000486021 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
CPNE1-226ENST00000486021 ABHD14A-ACY1A0A1B0GW23 586 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 C17orf102A2RUQ5 167 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 H3BRB1 525 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 DLL1O00548 723 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 SH2B2O14492 632 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-226ENST00000486021 ZBTB43O43298 467 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 ACRP10323 421 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 ATP2A2P16615 1042 aaKnown RBP8.58□□□□□ -1.04
CPNE1-226ENST00000486021 HOXA13P31271 388 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-226ENST00000486021 IKBKEQ14164 716 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 KIAA0753Q2KHM9 967 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 AAK1Q2M2I8 961 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 RASIP1Q5U651 963 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 CNKSR3Q6P9H4 555 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 METTL7BQ6UX53 244 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 OTOP2Q7RTS6 562 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 DEFB128Q7Z7B8 93 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 BICD2Q8TD16 824 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 COPS5Q92905 334 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 ALG1Q9BT22 464 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 ZBED2Q9BTP6 218 aa8.58□□□□□ -1.04
CPNE1-226ENST00000486021 TUT1Q9H6E5 874 aaKnown RBP8.58□□□□□ -1.04
CPNE1-226ENST00000486021 TRMT13Q9NUP7 481 aaKnown RBP8.58□□□□□ -1.04
CPNE1-226ENST00000486021 GRIN2DO15399 1336 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 M0QZ92 97 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 ARIH2O95376 493 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 F2P00734 622 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 CYP2C9P11712 490 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 GNA11P29992 359 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 NAPAP54920 295 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 IRX5P78411 483 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-226ENST00000486021 RBL2Q08999 1139 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 AP3B2Q13367 1082 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 RTN1Q16799 776 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 ODR4Q5SWX8 454 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 ERICH6BQ5W0A0 696 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 CPLX2Q6PUV4 134 aaKnown RBP8.57□□□□□ -1.04
CPNE1-226ENST00000486021 BLOC1S2Q6QNY1 142 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 LRRC8DQ7L1W4 858 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 MICU3Q86XE3 530 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPNE1-226ENST00000486021 PIBF1Q8WXW3 757 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 APBB2Q92870 758 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 ATP6V0A1Q93050 837 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 SCLYQ96I15 445 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 INPP4AQ96PE3 977 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-226ENST00000486021 SDF4Q9BRK5 362 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 PBX4Q9BYU1 374 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 IL25Q9H293 177 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 AZI2Q9H6S1 392 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 COL20A1Q9P218 1284 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 HDAC6Q9UBN7 1215 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 NAP1L2Q9ULW6 460 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-226ENST00000486021 MICAL3Q7RTP6 2002 aa8.57□□□□□ -1.04
CPNE1-226ENST00000486021 FRMPD4Q14CM0 1322 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 NRCAMQ92823 1304 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 RALGAPA2Q2PPJ7 1873 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 GOLGA8AA7E2F4 631 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 GOLGA8BA8MQT2 603 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 SPATA31C2B4DYI2 1134 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 HAS3O00219 553 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 CYTH3O43739 400 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 HOXD8P13378 290 aaPredicted RBP8.56□□□□□ -1.04
CPNE1-226ENST00000486021 UBA1P22314 1058 aaKnown RBP8.56□□□□□ -1.04
CPNE1-226ENST00000486021 ZNF76P36508 570 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 METAP2P50579 478 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPNE1-226ENST00000486021 EPHB4P54760 987 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 ANTXR2P58335 489 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 MTMR1Q13613 665 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
CPNE1-226ENST00000486021 APOA5Q6Q788 366 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 HEATR3Q7Z4Q2 680 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 CCDC148Q8NFR7 591 aa8.56□□□□□ -1.04
CPNE1-226ENST00000486021 MYLIPQ8WY64 445 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms