RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 EMC4Q5J8M3 183 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 MILR1Q7Z6M3 343 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 SAPCD2Q86UD0 394 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 SP8Q8IXZ3 490 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 ZCCHC4Q9H5U6 513 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 PARD6AQ9NPB6 346 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 PFDN2Q9UHV9 154 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 ARHGEF11O15085 1522 aa7.15□□□□□ -1.27
SMARCC1-207ENST00000485833 ADAMTS20P59510 1910 aa7.15□□□□□ -1.27
SMARCC1-207ENST00000485833 HGSO14964 777 aaPredicted RBP7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 ADCY3O60266 1144 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 CYP2C8P10632 490 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 RASA3Q14644 834 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 STEAP3Q658P3 488 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 STYK1Q6J9G0 422 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 FAM126BQ8IXS8 530 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 TP53I13Q8NBR0 393 aaPredicted RBP7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 ZFYVE21Q9BQ24 234 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 CDIP1Q9H305 208 aa7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 LUC7LQ9NQ29 371 aaKnown RBP7.14□□□□□ -1.27
SMARCC1-207ENST00000485833 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 SASH1O94885 1247 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 KCNT2Q6UVM3 1135 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 DPH6Q7L8W6 267 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 LRP10Q7Z4F1 713 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 ZC3H18Q86VM9 953 aaKnown RBP7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 DDX11Q96FC9 970 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 NOX5Q96PH1 765 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 DEPDC7Q96QD5 511 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 PCDH18Q9HCL0 1135 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 PPARGC1AQ9UBK2 798 aaKnown RBP7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 PCDHB4Q9Y5E5 795 aa7.13□□□□□ -1.27
SMARCC1-207ENST00000485833 BLACEA4D250 179 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 SH3D21A4FU49 640 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 DIAPH1O60610 1272 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 TADA3O75528 432 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 GPR85P60893 370 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 DLX2Q07687 328 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 KIZQ2M2Z5 673 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 LBX2Q6XYB7 198 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 LIPIQ6XZB0 460 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 ZBTB38Q8NAP3 1195 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.12□□□□□ -1.275e-6■■■■■ 56.5
SMARCC1-207ENST00000485833 CDC6Q99741 560 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 SNTG2Q9NY99 539 aa7.12□□□□□ -1.27
SMARCC1-207ENST00000485833 TCRBV5S2A0A599 114 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 MAFKO60675 156 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 HOXA5P20719 270 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 GRK2P25098 689 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 GRK3P35626 688 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 SOGA3Q5TF21 947 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 CD300LDQ6UXZ3 194 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 IFNL3Q8IZI9 196 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 FAM26EQ8N5C1 309 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 LINC00482Q8N8I6 264 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 PHOSPHO1Q8TCT1 267 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 ZNF526Q8TF50 670 aaPredicted RBP7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 ZBTB8AQ96BR9 441 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 GORASP1Q9BQQ3 440 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 YIPF4Q9BSR8 244 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 JAM3Q9BX67 310 aa7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 NGRNQ9NPE2 291 aaKnown RBP7.11□□□□□ -1.27
SMARCC1-207ENST00000485833 KDM2BQ8NHM5 1336 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 TRBV23-1A0A0A0MS06 115 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 FAM221BA6H8Z2 402 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 KRIT1O00522 736 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 STAT5AP42229 794 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 SUMO1P63165 101 aaKnown RBP7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 SCUBE1Q8IWY4 988 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 ADGRG2Q8IZP9 1017 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 SREK1Q8WXA9 508 aaKnown RBP7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 C11orf84Q9BUA3 381 aaPredicted RBP7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 XYLT2Q9H1B5 865 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 SMOC1Q9H4F8 434 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 SLC6A20Q9NP91 592 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 DTLQ9NZJ0 730 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 MYOTQ9UBF9 498 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 PEG3Q9GZU2 1588 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 ASXL2Q76L83 1435 aa7.1□□□□□ -1.27
SMARCC1-207ENST00000485833 A0A1B0GTL3 188 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 SLURP1P55000 103 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 SMAD4Q13485 552 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 LONRF2Q1L5Z9 754 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 CR1LQ2VPA4 569 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 FOXB2Q5VYV0 432 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 SYT8Q8NBV8 401 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 ARRDC4Q8NCT1 418 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 FEZF2Q8TBJ5 459 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 PIP4K2CQ8TBX8 421 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 MKL1Q969V6 931 aa7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 IPO9Q96P70 1041 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 SRPK1Q96SB4 655 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-207ENST00000485833 A0A0G2JLL6 359 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 OTOL1A6NHN0 477 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 SMARCA5O60264 1052 aaPredicted RBP7.08□□□□□ -1.28
SMARCC1-207ENST00000485833 FAM153BP0C7A2 387 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms