RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 KATNAL1Q9BW62 490 aa13.99□□□□□ -0.17
LTBR-204ENST00000444814 BACH2Q9BYV9 841 aa13.99□□□□□ -0.17
LTBR-204ENST00000444814 A0A1W2PQ45 241 aaPredicted RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 A0A1W2PQY0 241 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 NOP56O00567 594 aaKnown RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 ICAM3P32942 547 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 MTMR1Q13613 665 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 DGKDQ16760 1214 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 ME3Q16798 604 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 SLC39A5Q6ZMH5 540 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 SENP7Q9BQF6 1050 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 MTG1Q9BT17 334 aaPredicted RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 VPS54Q9P1Q0 977 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 DDX41Q9UJV9 622 aaKnown RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 PCDHA4Q9UN74 947 aa13.98□□□□□ -0.17
LTBR-204ENST00000444814 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
LTBR-204ENST00000444814 SREBF1P36956 1147 aa13.97□□□□□ -0.17
LTBR-204ENST00000444814 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
LTBR-204ENST00000444814 SAFBQ15424 915 aaKnown RBP eCLIP13.97□□□□□ -0.17
LTBR-204ENST00000444814 PRPF38BQ5VTL8 546 aaKnown RBP13.97□□□□□ -0.17
LTBR-204ENST00000444814 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
LTBR-204ENST00000444814 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
LTBR-204ENST00000444814 BCCIPQ9P287 314 aaKnown RBP eCLIP13.97□□□□□ -0.17
LTBR-204ENST00000444814 A6NJR5 290 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 MYL3P08590 195 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 CLK2P49760 499 aaKnown RBP13.96□□□□□ -0.17
LTBR-204ENST00000444814 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
LTBR-204ENST00000444814 LY6KQ17RY6 165 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 JAKMIP3Q5VZ66 844 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 NIPA1Q7RTP0 329 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 KRT25Q7Z3Z0 450 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 BLIDQ8IZY5 108 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 PPTC7Q8NI37 304 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 SDF4Q9BRK5 362 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 ALG1Q9BT22 464 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 JADE2Q9NQC1 790 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 RTEL1Q9NZ71 1219 aa13.96□□□□□ -0.17
LTBR-204ENST00000444814 CCDC194A0A1B0GVG4 234 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 GGPS1O95749 300 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.18
LTBR-204ENST00000444814 RTP1P59025 263 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 ARHGAP4P98171 946 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 BEX3Q00994 111 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 CEP55Q53EZ4 464 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 CELF3Q5SZQ8 465 aaKnown RBP13.96□□□□□ -0.18
LTBR-204ENST00000444814 CCSAPQ6IQ19 270 aaPredicted RBP13.96□□□□□ -0.18
LTBR-204ENST00000444814 TYW1BQ6NUM6 668 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 METTL7BQ6UX53 244 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 C7orf61Q8IZ16 206 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 NECAB1Q8N987 351 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 IL31RAQ8NI17 732 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.18
LTBR-204ENST00000444814 TOX2Q96NM4 488 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 MXRA8Q9BRK3 442 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 UBIAD1Q9Y5Z9 338 aa13.96□□□□□ -0.18
LTBR-204ENST00000444814 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.18
LTBR-204ENST00000444814 LRRC37A2A6NM11 1700 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 FRMPD3Q5JV73 1810 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 ARVCFO00192 962 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 ADCY6O43306 1168 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 PPFIA4O75335 1185 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 CYP3A4P08684 503 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 USP11P51784 963 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
LTBR-204ENST00000444814 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
LTBR-204ENST00000444814 SNX17Q15036 470 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 KIF2CQ99661 725 aa13.95□□□□□ -0.18
LTBR-204ENST00000444814 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
LTBR-204ENST00000444814 LCTP09848 1927 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 MMP3P08254 477 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 UBA1P22314 1058 aaKnown RBP13.94□□□□□ -0.18
LTBR-204ENST00000444814 ARHGAP1Q07960 439 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 ITGA7Q13683 1181 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 NONOQ15233 471 aaKnown RBP eCLIP13.94□□□□□ -0.18
LTBR-204ENST00000444814 LRRC26Q2I0M4 334 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 CXCL17Q6UXB2 119 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 CCDC83Q8IWF9 413 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 NSUN7Q8NE18 718 aaKnown RBP13.94□□□□□ -0.18
LTBR-204ENST00000444814 AFG1LQ8WV93 481 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 ZNF215Q9UL58 517 aaPredicted RBP13.94□□□□□ -0.18
LTBR-204ENST00000444814 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.94□□□□□ -0.18
LTBR-204ENST00000444814 MCM3APO60318 1980 aa13.94□□□□□ -0.18
LTBR-204ENST00000444814 MYADML2A6NDP7 307 aa13.93□□□□□ -0.18
LTBR-204ENST00000444814 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
LTBR-204ENST00000444814 ARIH2O95376 493 aa13.93□□□□□ -0.18
LTBR-204ENST00000444814 KRT2P35908 639 aa13.93□□□□□ -0.18
LTBR-204ENST00000444814 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
LTBR-204ENST00000444814 MYSM1Q5VVJ2 828 aa13.93□□□□□ -0.18
LTBR-204ENST00000444814 ANKRD33Q7Z3H0 272 aa13.93□□□□□ -0.18
LTBR-204ENST00000444814 PHF20Q9BVI0 1012 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms