RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ITGB1P05556 798 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 MYL3P08590 195 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 HOXB8P17481 243 aaPredicted RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 NOVA1P51513 510 aaKnown RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 RBL2Q08999 1139 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 TMEM63BQ5T3F8 832 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 SNRNP48Q6IEG0 339 aaKnown RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 POF1BQ8WVV4 589 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 FGD4Q96M96 766 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 CDCA3Q99618 268 aaPredicted RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 IFIH1Q9BYX4 1025 aaKnown RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 GPHNQ9NQX3 736 aaPredicted RBP8.93□□□□□ -0.98
SSXP3-201ENST00000442971 CYP26B1Q9NR63 512 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 CA14Q9ULX7 337 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 NEUROG3Q9Y4Z2 214 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 CELSR3Q9NYQ7 3312 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 PATJQ8NI35 1801 aa8.93□□□□□ -0.98
SSXP3-201ENST00000442971 GIPC1O14908 333 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 NARSO43776 548 aaKnown RBP8.92□□□□□ -0.98
SSXP3-201ENST00000442971 DUSP6Q16828 381 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 STPG1Q5TH74 334 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 CES5AQ6NT32 575 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 FAM133AQ8N9E0 248 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 DHX38Q92620 1227 aaKnown RBP8.92□□□□□ -0.98
SSXP3-201ENST00000442971 CTAGE1Q96RT6 745 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
SSXP3-201ENST00000442971 USTQ9Y2C2 406 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 MSRB2Q9Y3D2 182 aa8.92□□□□□ -0.98
SSXP3-201ENST00000442971 PARP14Q460N5 1801 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 MMP3P08254 477 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 FGFR2P21802 821 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 KCNC3Q14003 757 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 MBTPS1Q14703 1052 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 NAALADL2Q58DX5 795 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 TEX11Q8IYF3 940 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 CELF5Q8N6W0 485 aaKnown RBP8.91□□□□□ -0.98
SSXP3-201ENST00000442971 PJA1Q8NG27 643 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 MICAL1Q8TDZ2 1067 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 ADAMTS5Q9UNA0 930 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 ADGRA3Q8IWK6 1321 aa8.91□□□□□ -0.98
SSXP3-201ENST00000442971 MIA3Q5JRA6 1907 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 LRRN2O75325 713 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 MTHFRP42898 656 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 LMOD3Q0VAK6 560 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 PUM3Q15397 648 aaKnown RBP8.9□□□□□ -0.98
SSXP3-201ENST00000442971 LRRC24Q50LG9 513 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 IQSEC1Q6DN90 963 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 MKNK1Q9BUB5 465 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 ADAM7Q9H2U9 754 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 KCNK12Q9HB15 430 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 ABCF2Q9UG63 623 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 ZNF214Q9UL59 606 aaPredicted RBP8.9□□□□□ -0.98
SSXP3-201ENST00000442971 DENND2AQ9ULE3 1009 aa8.9□□□□□ -0.98
SSXP3-201ENST00000442971 ACACAQ13085 2346 aa8.9□□□□□ -0.99
SSXP3-201ENST00000442971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.89□□□□□ -0.99
SSXP3-201ENST00000442971 SEMA3EO15041 775 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 EOMESO95936 686 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 CPT1AP50416 773 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 ITIH3Q06033 890 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 KLHL23Q8NBE8 558 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 BCO2Q9BYV7 579 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 FOXQ1Q9C009 403 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 PDGFCQ9NRA1 345 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
SSXP3-201ENST00000442971 PALD1Q9ULE6 856 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 EMSYQ7Z589 1322 aa8.89□□□□□ -0.99
SSXP3-201ENST00000442971 A0A1W2PRG0 241 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 ELL2O00472 640 aaPredicted RBP8.88□□□□□ -0.99
SSXP3-201ENST00000442971 ATXN7O15265 892 aaPredicted RBP8.88□□□□□ -0.99
SSXP3-201ENST00000442971 MECOMQ03112 1051 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 ABCB5Q2M3G0 1257 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 PLEKHG4Q58EX7 1191 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 ZNF618Q5T7W0 954 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 GDF6Q6KF10 455 aaPredicted RBP8.88□□□□□ -0.99
SSXP3-201ENST00000442971 LLGL2Q6P1M3 1020 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 TATDN1Q6P1N9 297 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 XRRA1Q6P2D8 792 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 TSSK4Q6SA08 328 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 SLC4A10Q6U841 1118 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 C12orf50Q8NA57 414 aaPredicted RBP8.88□□□□□ -0.99
SSXP3-201ENST00000442971 LINS1Q8NG48 757 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 MYL10Q9BUA6 226 aa8.88□□□□□ -0.99
SSXP3-201ENST00000442971 FAM126AQ9BYI3 521 aaPredicted RBP8.88□□□□□ -0.99
SSXP3-201ENST00000442971 DBR1Q9UK59 544 aaKnown RBP8.88□□□□□ -0.99
SSXP3-201ENST00000442971 PLXNA4Q9HCM2 1894 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 VWA5AO00534 786 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 SNPHO15079 494 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 HYAL3O43820 417 aaPredicted RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 WEE2P0C1S8 567 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 CHMP4BP1P59074 171 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 BTG3Q14201 252 aaPredicted RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 SF3A2Q15428 464 aaKnown RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 SPTY2D1Q68D10 685 aaPredicted RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 KIAA1211LQ6NV74 962 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 TAPT1Q6NXT6 567 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms