RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 EPHA5P54756 1037 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SLURP1P55000 103 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ITGA1P56199 1179 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 GPR85P60893 370 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SSRP1Q08945 709 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 IFRD2Q12894 506 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ADAM9Q13443 819 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SMAD4Q13485 552 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SLC9A5Q14940 896 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 TARBP2Q15633 366 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 KIZQ2M2Z5 673 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 MTERF2Q49AM1 385 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 HABP4Q5JVS0 413 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PRR31Q5SQ13 230 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 STEAP3Q658P3 488 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 RSPO2Q6UXX9 243 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 LBX2Q6XYB7 198 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 LIPIQ6XZB0 460 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ETV3LQ6ZN32 361 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 OTOP3Q7RTS5 596 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 LRP10Q7Z4F1 713 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 MILR1Q7Z6M3 343 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SAPCD2Q86UD0 394 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 STK32CQ86UX6 486 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 CABP7Q86V35 215 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PROSER1Q86XN7 944 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 TMEM151BQ8IW70 566 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 FAM126BQ8IXS8 530 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 RBM12BQ8IXT5 1001 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 IFNL3Q8IZI9 196 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ZDHHC14Q8IZN3 488 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 CARFQ8N187 725 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 LILRB2Q8N423 598 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 LINC00482Q8N8I6 264 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 JMYQ8N9B5 988 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 MARCH10Q8NA82 808 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 KYQ8NBH2 561 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SYT8Q8NBV8 401 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PCDH19Q8TAB3 1148 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 UHMK1Q8TAS1 419 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PUM2Q8TB72 1066 aaKnown RBP eCLIP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 FEZF2Q8TBJ5 459 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PIP4K2CQ8TBX8 421 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PMFBP1Q8TBY8 1022 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SH3RF2Q8TEC5 729 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 USP33Q8TEY7 942 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ZNF526Q8TF50 670 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 CLEC4DQ8WXI8 215 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 MKL1Q969V6 931 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ZBTB8AQ96BR9 441 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 DDX11Q96FC9 970 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SCLYQ96I15 445 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 CHAMP1Q96JM3 812 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PWWP2AQ96N64 755 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 DNAJC2Q99543 621 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 KCNJ15Q99712 375 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ZFYVE21Q9BQ24 234 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SPATA25Q9BR10 227 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 C11orf84Q9BUA3 381 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 HIRIP3Q9BW71 556 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 JAM3Q9BX67 310 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 KRTAP4-7Q9BYR0 210 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 CD244Q9BZW8 370 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PDGFDQ9GZP0 370 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 RNF38Q9H0F5 515 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 AP5M1Q9H0R1 490 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ADAM7Q9H2U9 754 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 IPPKQ9H8X2 491 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 KANSL2Q9H9L4 492 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SLC52A2Q9HAB3 445 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SLC6A20Q9NP91 592 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PARD6AQ9NPB6 346 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 LUC7LQ9NQ29 371 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SNTG2Q9NY99 539 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 DTLQ9NZJ0 730 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 SIRPGQ9P1W8 387 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 MYOTQ9UBF9 498 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 RBPJLQ9UBG7 517 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ASH2LQ9UBL3 628 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PPP1R1BQ9UD71 204 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 NUDT5Q9UKK9 219 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 FAN1Q9Y2M0 1017 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 MRPS23Q9Y3D9 190 aaKnown RBP0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 TRAF6Q9Y4K3 522 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 TELO2Q9Y4R8 837 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PCDHA9Q9Y5H5 950 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PCDHA8Q9Y5H6 950 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 PTCH2Q9Y6C5 1203 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 KDM2BQ8NHM5 1336 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 ADAMTS20P59510 1910 aa0.77□□□□□ -2.29
SNORA40.8-201ENST00000411034 NCANO14594 1321 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 LOC101059915A0A1B0GWI6 518 aaPredicted RBP0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 FAM83GA6ND36 823 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 FAM90A27PA6NNH2 459 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 FAM47E-STBD1D6RA91 191 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 ZNF561-AS1K7EIQ3 104 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 ARVCFO00192 962 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 KRIT1O00522 736 aa0.76□□□□□ -2.29
SNORA40.8-201ENST00000411034 MAN2B1O00754 1011 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms