RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 SYT11Q9BT88 431 aa9.52□□□□□ -0.89
GAPVD1-204ENST00000394083 PIK3CDO00329 1044 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 MEFVO15553 781 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CIITAP33076 1130 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CAP2P40123 477 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 GIT2Q14161 759 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 ASPRV1Q53RT3 343 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 SPECC1LQ69YQ0 1117 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 PPIP5K2O43314 1243 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 PPP1R37O75864 691 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 H2AFXP16104 143 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CASP4P49662 377 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 SMCR8Q8TEV9 937 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 SMARCE1Q969G3 411 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 PPP2R2CQ9Y2T4 447 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 B4DLN1 442 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 RAD54LQ92698 747 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 ADAMTS5Q9UNA0 930 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CAVIN2O95810 425 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CCNE2O96020 404 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 PNMA6AP0CW24 399 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.896e-10■□□□□ 10.4
GAPVD1-204ENST00000394083 SYT10Q6XYQ8 523 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 CABP7Q86V35 215 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 ZKSCAN4Q969J2 545 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 HAPLN2Q9GZV7 340 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 SUGCTQ9HAC7 445 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
GAPVD1-204ENST00000394083 ZRANB2O95218 330 aaKnown RBP eCLIP9.5□□□□□ -0.897e-6■■■■■ 37.3
GAPVD1-204ENST00000394083 KIF4BQ2VIQ3 1234 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 SLFN13Q68D06 897 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 RSRC2Q7L4I2 434 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 LMO3Q8TAP4 145 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ZBTB9Q96C00 473 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 HDAC6Q9UBN7 1215 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 PALB2Q86YC2 1186 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ENTPD3O75355 529 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 SMC2O95347 1197 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 MYBP10242 640 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 HSD17B4P51659 736 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 MCCD1P59942 119 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 NONOQ15233 471 aaKnown RBP eCLIP9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 WDR11Q9BZH6 1224 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ANKZF1Q9H8Y5 726 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 MYOZ2Q9NPC6 264 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ITIH6Q6UXX5 1313 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 SPENQ96T58 3664 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 TNNT1P13805 278 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ATP4AP20648 1035 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ICA1Q05084 483 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ZYXQ15942 572 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 ANO3Q9BYT9 981 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 SWAP70Q9UH65 585 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 FHOD1Q9Y613 1164 aa9.5□□□□□ -0.89
GAPVD1-204ENST00000394083 KCNJ18B7U540 433 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 KCNJ12Q14500 433 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 Q4G0T1 1027 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 FAM151AQ8WW52 585 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 PNKPQ96T60 521 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 ZNF214Q9UL59 606 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 SCN1AP35498 2009 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 TBC1D12O60347 775 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 MYBL2P10244 700 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 TRIM29Q14134 588 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 ERCC6LQ2NKX8 1250 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 SOGA3Q5TF21 947 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 TTLL6Q8N841 843 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 EHD2Q9NZN4 543 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 KIF5BP33176 963 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 ABCB5Q2M3G0 1257 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 DTHD1Q6ZMT9 781 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 ZNF112Q9UJU3 913 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 CAPN6Q9Y6Q1 641 aa9.49□□□□□ -0.89
GAPVD1-204ENST00000394083 MSNP26038 577 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 SOX10P56693 466 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 ZC2HC1CQ53FD0 456 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 MB21D1Q8N884 522 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 REEP2Q9BRK0 252 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 TADA3O75528 432 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 LDHCP07864 332 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 COASYQ13057 564 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 TAS1R3Q7RTX0 852 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 PSTPIP2Q9H939 334 aa9.48□□□□□ -0.89
GAPVD1-204ENST00000394083 DDX25Q9UHL0 483 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms