RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CFAP74Q9C0B2 1584 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.81□□□□□ -1.32
PMS1-202ENST00000374826 ITSN2Q9NZM3 1697 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 STXBP3O00186 592 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 AKAP8O43823 692 aaKnown RBP6.8□□□□□ -1.32
PMS1-202ENST00000374826 PPM1BO75688 479 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 SSBP05455 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
PMS1-202ENST00000374826 ZXDAP98168 799 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 SMAD4Q13485 552 aaKnown RBP6.8□□□□□ -1.32
PMS1-202ENST00000374826 GNL2Q13823 731 aaKnown RBP6.8□□□□□ -1.32
PMS1-202ENST00000374826 CPZQ66K79 652 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 SUPT6HQ7KZ85 1726 aaKnown RBP6.8□□□□□ -1.32
PMS1-202ENST00000374826 SAMD11Q96NU1 681 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 SUGT1Q9Y2Z0 365 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 MRVI1Q9Y6F6 885 aa6.8□□□□□ -1.32
PMS1-202ENST00000374826 RICTORQ6R327 1708 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 VPS8Q8N3P4 1428 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 SMARCA5O60264 1052 aaPredicted RBP6.79□□□□□ -1.32
PMS1-202ENST00000374826 PLATP00750 562 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 PAMP19021 973 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 KIAA2012Q0VF49 1180 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 TBC1D10BQ4KMP7 808 aaPredicted RBP6.79□□□□□ -1.32
PMS1-202ENST00000374826 ARHGEF39Q8N4T4 335 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 C1QTNF3Q9BXJ4 246 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.79□□□□□ -1.32
PMS1-202ENST00000374826 CGGBP1Q9UFW8 167 aaPredicted RBP6.79□□□□□ -1.32
PMS1-202ENST00000374826 BACE2Q9Y5Z0 518 aa6.79□□□□□ -1.32
PMS1-202ENST00000374826 EHBP1L1Q8N3D4 1523 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 NPHP3-ACAD11A0A0J9YXS1 232 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 C7orf72A4D263 438 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 ANKRD34BA5PLL1 514 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
PMS1-202ENST00000374826 MATN3O15232 486 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 NTRK1P04629 796 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 CYP2C8P10632 490 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 WWC2Q6AWC2 1192 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 RCC1LQ96I51 464 aaKnown RBP6.78□□□□□ -1.32
PMS1-202ENST00000374826 GORASP1Q9BQQ3 440 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 TINF2Q9BSI4 451 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 C11orf84Q9BUA3 381 aaPredicted RBP6.78□□□□□ -1.32
PMS1-202ENST00000374826 PCDH18Q9HCL0 1135 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 SIT1Q9Y3P8 196 aa6.78□□□□□ -1.32
PMS1-202ENST00000374826 TRBV23OR9-2A0A075B6M9 112 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 FUCA1P04066 466 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 C8BP07358 591 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 RPL13P26373 211 aaKnown RBP6.77□□□□□ -1.33
PMS1-202ENST00000374826 AMPD2Q01433 879 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 GRB10Q13322 594 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 RGL3Q3MIN7 710 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 TNNI3KQ59H18 835 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 TTC9BQ8N6N2 239 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 LOXL4Q96JB6 756 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 C8orf49Q96NF6 230 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 SYT3Q9BQG1 590 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.77□□□□□ -1.33
PMS1-202ENST00000374826 ACTR10Q9NZ32 417 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 PODXL2Q9NZ53 605 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 APEX2Q9UBZ4 518 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
PMS1-202ENST00000374826 TROQ12816 1431 aaPredicted RBP6.76□□□□□ -1.33
PMS1-202ENST00000374826 NPHS1O60500 1241 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 FGRP09769 529 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 NAT2P11245 290 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 ZNF20P17024 532 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 THBS2P35442 1172 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
PMS1-202ENST00000374826 NCAPHQ15003 741 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 ZNF513Q8N8E2 541 aaPredicted RBP6.76□□□□□ -1.33
PMS1-202ENST00000374826 KYQ8NBH2 561 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 PLEKHO2Q8TD55 490 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 PRKAG3Q9UGI9 489 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 CD109Q6YHK3 1445 aa6.76□□□□□ -1.33
PMS1-202ENST00000374826 FRMPD1Q5SYB0 1578 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 PLEKHD1A6NEE1 506 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 ARID5AQ03989 594 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 LARP1BQ659C4 914 aaKnown RBP6.75□□□□□ -1.33
PMS1-202ENST00000374826 C6orf15Q6UXA7 325 aaPredicted RBP6.75□□□□□ -1.33
PMS1-202ENST00000374826 LGI4Q8N135 537 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
PMS1-202ENST00000374826 APBA2Q99767 749 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 SSBP3Q9BWW4 388 aaPredicted RBP6.75□□□□□ -1.33
PMS1-202ENST00000374826 AKT3Q9Y243 479 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 ARHGAP5Q13017 1502 aa6.75□□□□□ -1.33
PMS1-202ENST00000374826 MROH6A6NGR9 719 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 ETFBP38117 255 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 RBM10P98175 930 aaKnown RBP6.74□□□□□ -1.33
PMS1-202ENST00000374826 FAM26FQ5R3K3 315 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 ETV3LQ6ZN32 361 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 SLC16A11Q8NCK7 471 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 DPF3Q92784 378 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
PMS1-202ENST00000374826 FANCAO15360 1455 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 ARAP3Q8WWN8 1544 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 KCNH1O95259 989 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 FSHBP01225 129 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 DNAJA1P31689 397 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms