RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 CXXC1Q9P0U4 656 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC3-202ENST00000373162 SNX14Q9Y5W7 946 aa20.75■□□□□ 0.91
TRAPPC3-202ENST00000373162 GBF1Q92538 1859 aa20.75■□□□□ 0.91
TRAPPC3-202ENST00000373162 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 PITPNM1O00562 1244 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 GGPS1O95749 300 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 CASTP20810 708 aaKnown RBP20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 DGKDQ16760 1214 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 PCNX4Q63HM2 1172 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 GDF6Q6KF10 455 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 TYW1BQ6NUM6 668 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 DHX38Q92620 1227 aaKnown RBP20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 SCLYQ96I15 445 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 SEC63Q9UGP8 760 aaKnown RBP20.74■□□□□ 0.91
TRAPPC3-202ENST00000373162 hCG_1642624A0A1W2PR95 340 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 SPATA31C2B4DYI2 1134 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 DLL1O00548 723 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 HOXC8P31273 242 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 ZNF697Q5TEC3 545 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 DHX37Q8IY37 1157 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 TET1Q8NFU7 2136 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 C16orf70Q9BSU1 422 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 GTF2IRD1Q9UHL9 959 aa20.73■□□□□ 0.91
TRAPPC3-202ENST00000373162 PPFIA4O75335 1185 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 ZNF286BP0CG31 522 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 CPA1P15085 419 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 CDC27P30260 824 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 PSEN2P49810 448 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 HIC1Q14526 733 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 GPNMBQ14956 572 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 WWC2Q6AWC2 1192 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 RBM28Q9NW13 759 aaKnown RBP20.72■□□□□ 0.91
TRAPPC3-202ENST00000373162 FIBPO43427 364 aa20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 EPB41L2O43491 1005 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 DNAJB2P25686 324 aa20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 TRIM71Q2Q1W2 868 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 FAM47CQ5HY64 1035 aa20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 HDAC6Q9UBN7 1215 aa20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 TELO2Q9Y4R8 837 aa20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 TRIP12Q14669 1992 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 PRUNE2Q8WUY3 3088 aa20.71■□□□□ 0.91
TRAPPC3-202ENST00000373162 PTPRSQ13332 1948 aa20.7■□□□□ 0.91
TRAPPC3-202ENST00000373162 GRXCR1A8MXD5 290 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 ZBTB43O43298 467 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 FGBP02675 491 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 PFKMP08237 780 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 MFSD10Q14728 455 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 RTN1Q16799 776 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 GNPTABQ3T906 1256 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 TRAF7Q6Q0C0 670 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 METTL7BQ6UX53 244 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 TEX2Q8IWB9 1127 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 CCDC82Q8N4S0 544 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 SPATA33Q96N06 139 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 SENP7Q9BQF6 1050 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 PBX4Q9BYU1 374 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
TRAPPC3-202ENST00000373162 KLF18A0A0U1RQI7 1052 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 IQCF3P0C7M6 154 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 ITGB5P18084 799 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 PBX2P40425 430 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 PTGISQ16647 500 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 UBE2SQ16763 222 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 KIAA0753Q2KHM9 967 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 PPP1R18Q6NYC8 613 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 CUL5Q93034 780 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 WNT8BQ93098 351 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 FAM161BQ96MY7 647 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 CDX2Q99626 313 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 KATNAL1Q9BW62 490 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 UBIAD1Q9Y5Z9 338 aa20.69■□□□□ 0.9
TRAPPC3-202ENST00000373162 CHD7Q9P2D1 2997 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 STXBP3O00186 592 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 RFC2P35250 354 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 EVCP57679 992 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 CAGE1Q8TC20 777 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 GPR20Q99678 358 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 RTEL1Q9NZ71 1219 aa20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 SPTBN5Q9NRC6 3674 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-202ENST00000373162 GOLGA8AA7E2F4 631 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 SORBS3O60504 671 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 LGALS2P05162 132 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 KCNA2P16389 499 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 RPS6KB1P23443 525 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 CLK2P49760 499 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 BFSP2Q13515 415 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 NEDD9Q14511 834 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 Q6ZUG5 572 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 OTOP2Q7RTS6 562 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 RPUSD2Q8IZ73 545 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 AFAP1L1Q8TED9 768 aa20.67■□□□□ 0.9
TRAPPC3-202ENST00000373162 GPRASP2Q96D09 838 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms