RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PRR5P85299 388 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 NR1I3Q14994 352 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 CFAP100Q494V2 611 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 STEAP3Q658P3 488 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 OVCH1Q7RTY7 1134 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 FILIP1Q7Z7B0 1213 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZNF605Q86T29 641 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 THNSL2Q86YJ6 484 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 IRF2BP1Q8IU81 584 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 CISD2Q8N5K1 135 aaKnown RBP6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 UBR7Q8N806 425 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 SH3RF2Q8TEC5 729 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZNF552Q9H707 407 aaPredicted RBP6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 SLC6A20Q9NP91 592 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 M0R2C6 588 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 HGSO14964 777 aaPredicted RBP6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 SLC27A2O14975 620 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 PDE8AO60658 829 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 KPNA6O60684 536 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 TADA3O75528 432 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 APPP05067 770 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 KRT15P19012 456 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 YBX1P67809 324 aaKnown RBP6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 CRY1Q16526 586 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 MLANAQ16655 118 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 FAM47CQ5HY64 1035 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 HABP4Q5JVS0 413 aaKnown RBP6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 ARHGAP36Q6ZRI8 547 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 MILR1Q7Z6M3 343 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 DDX53Q86TM3 631 aaKnown RBP6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 WNK4Q96J92 1243 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 CELF4Q9BZC1 486 aaKnown RBP6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 NSUN3Q9H649 340 aaKnown RBP6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 IFT57Q9NWB7 429 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 PALD1Q9ULE6 856 aa6.14□□□□□ -1.43
RNU6-560P-201ENST00000364007 ANKRD62A6NC57 917 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 B4E1Z4 1266 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 TRAF5O00463 557 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 GSTA4O15217 222 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 LTFP02788 710 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 POU3F2P20265 443 aaPredicted RBP6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 VIPR1P32241 457 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 SLC6A11P48066 632 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 MAPKAPK2P49137 400 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 LACTBP83111 547 aaPredicted RBP6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 SKOR2Q2VWA4 1001 aaPredicted RBP6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 PLEKHN1Q494U1 663 aaPredicted RBP6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 TAF7LQ5H9L4 462 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 EMC4Q5J8M3 183 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 XP32Q5T750 250 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 UBE2R2Q712K3 238 aaPredicted RBP6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 DCP2Q8IU60 420 aaKnown RBP6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 SEC14L1Q92503 715 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 PEX11GQ96HA9 241 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 SPC25Q9HBM1 224 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 SMURF1Q9HCE7 757 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 DSEQ9UL01 958 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 TELO2Q9Y4R8 837 aa6.13□□□□□ -1.43
RNU6-560P-201ENST00000364007 MYOCOSA0A1B0GUC4 107 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 TCRBV5S2A0A599 114 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 LRRC10BA6NIK2 292 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 KRIT1O00522 736 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 DNAJC6O75061 913 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 CANXP27824 592 aaKnown RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 FLT3P36888 993 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 STAT3P40763 770 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 SRSF3P84103 164 aaKnown RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 GPR19Q15760 415 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 RNF187Q5TA31 235 aaPredicted RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 PKN3Q6P5Z2 889 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 ZC3H14Q6PJT7 736 aaKnown RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 RNF180Q86T96 592 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 PTRH1Q86Y79 214 aaKnown RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 NXPE1Q8N323 547 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 ARRDC4Q8NCT1 418 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 LEO1Q8WVC0 666 aaPredicted RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 CLEC4DQ8WXI8 215 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 FAM126AQ9BYI3 521 aaPredicted RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 CD244Q9BZW8 370 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 AP5M1Q9H0R1 490 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 SMOC1Q9H4F8 434 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 DCP1AQ9NPI6 582 aaPredicted RBP6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 NUDT5Q9UKK9 219 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 PRKAB1Q9Y478 270 aa6.12□□□□□ -1.43
RNU6-560P-201ENST00000364007 CBX4O00257 560 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 MAN2B1O00754 1011 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 NPTXRO95502 500 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 MECP2P51608 486 aaKnown RBP6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 ZNF200P98182 395 aaPredicted RBP6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 CHRNA2Q15822 529 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 SEPT7Q16181 437 aaKnown RBP6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 MCTP1Q6DN14 999 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 TMC6Q7Z403 805 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 C2orf69Q8N8R5 385 aa6.11□□□□□ -1.43
RNU6-560P-201ENST00000364007 UHMK1Q8TAS1 419 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms