RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 HIBCHQ6NVY1 386 aaPredicted RBP16.15■□□□□ 0.18
TOP3B-201ENST00000357179 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
TOP3B-201ENST00000357179 THOC1Q96FV9 657 aaKnown RBP16.15■□□□□ 0.18
TOP3B-201ENST00000357179 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
TOP3B-201ENST00000357179 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
TOP3B-201ENST00000357179 ABCF2Q9UG63 623 aa16.15■□□□□ 0.18
TOP3B-201ENST00000357179 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 PSMA7O14818 248 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 NCK2O43639 380 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 ATP2C2O75185 946 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 RHOBTB3O94955 611 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 RWDD2BP57060 319 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 CCHCR1Q8TD31 782 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 BSDC1Q9NW68 430 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-201ENST00000357179 A0A1W2PQJ5 194 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 H0YGN5 161 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 LCA5LO95447 670 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 KLK7P49862 253 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 PMS1P54277 932 aaKnown RBP16.14■□□□□ 0.17
TOP3B-201ENST00000357179 BIRC3Q13489 604 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 FIGNQ5HY92 759 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 RAPGEF5Q92565 580 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 NFS1Q9Y697 457 aa16.14■□□□□ 0.17
TOP3B-201ENST00000357179 SMNDC1O75940 238 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■■■■□ 24.8
TOP3B-201ENST00000357179 PLEKP08567 350 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 TMOD1P28289 359 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 HNRNPH3P31942 346 aaKnown RBP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 NT5C2P49902 561 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 PPP1R7Q15435 360 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 CAPRIN2Q6IMN6 1127 aaKnown RBP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 GIMAP8Q8ND71 665 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■■■■ 56.2
TOP3B-201ENST00000357179 IQCDQ96DY2 449 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 DHTKD1Q96HY7 919 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 MS4A14Q96JA4 679 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 PHLPP1O60346 1717 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 KLRC4O43908 158 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 ANP32DO95626 131 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 KIF5BP33176 963 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 PEX19P40855 299 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 NAALADL2Q58DX5 795 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 MIS18BP1Q6P0N0 1132 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 CCSER1Q9C0I3 900 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 MAGEF1Q9HAY2 307 aa16.13■□□□□ 0.17
TOP3B-201ENST00000357179 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.13■□□□□ 0.17
TOP3B-201ENST00000357179 CYP2D7A0A087X1C5 515 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 PPP2R2AP63151 447 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 UBE4AQ14139 1066 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 TTI2Q6NXR4 508 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 PARD3BQ8TEW8 1205 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 TUBGCP2Q9BSJ2 902 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 CUEDC2Q9H467 287 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 KBTBD4Q9NVX7 518 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 COL1A1P02452 1464 aaPredicted RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 GSTA1P08263 222 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 PPP1R2P41236 205 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 KLHDC7AQ5VTJ3 777 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 DTHD1Q6ZMT9 781 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 ARHGAP20Q9P2F6 1191 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 PLAGL2Q9UPG8 496 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 XIRP1Q702N8 1843 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 CCT8L1PA6NM43 557 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 PJA2O43164 708 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 TRIM37O94972 964 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 SNUPNO95149 360 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 DRD4P21917 467 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 HSD17B3P37058 310 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 KIF11P52732 1056 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 RBBP5Q15291 538 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 EIF1ADQ8N9N8 165 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 CNOT8Q9UFF9 292 aaKnown RBP16.12■□□□□ 0.17
TOP3B-201ENST00000357179 SALL4Q9UJQ4 1053 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 A0A1B0GUL6 1792 aa16.12■□□□□ 0.17
TOP3B-201ENST00000357179 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 USP17L21D6R901 530 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 LAD1O00515 517 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 BACH1O14867 736 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 NTSR2O95665 410 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 ZNF844Q08AG5 666 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 TRADDQ15628 312 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 AGBL2Q5U5Z8 902 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 RUFY4Q6ZNE9 571 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 FAM114A1Q8IWE2 563 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 CORO1CQ9ULV4 474 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-201ENST00000357179 SLC12A4Q9UP95 1085 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 LAMB1P07942 1786 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-201ENST00000357179 CPLX4Q7Z7G2 160 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 CCDC63Q8NA47 563 aa16.11■□□□□ 0.17
TOP3B-201ENST00000357179 ZNF570Q96NI8 536 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms