RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CTDP1Q9Y5B0 961 aaPredicted RBP5.45□□□□□ -1.54
SKP1-202ENST00000353411 IPO5O00410 1097 aaKnown RBP5.45□□□□□ -1.54
SKP1-202ENST00000353411 DEXIO95424 95 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 CALM1P0DP23 149 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 CALM2P0DP24 149 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 CALM3P0DP25 149 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 RGS2P41220 211 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 KRT81Q14533 505 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 RCN1Q15293 331 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 FRA10AC1Q70Z53 315 aa5.45□□□□□ -1.54
SKP1-202ENST00000353411 DAB1O75553 588 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 AGTP01019 485 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GSTT1P30711 240 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GOLGA8FQ08AF8 430 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GOLGA8DPQ0D2H9 430 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 NPATQ14207 1427 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PSMD6Q15008 389 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 OGFOD1Q8N543 542 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 MRRFQ96E11 262 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 TGS1Q96RS0 853 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 ANLNQ9NQW6 1124 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GIMAP4Q9NUV9 329 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PCDHA5Q9Y5H7 936 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 ASPHQ12797 758 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PPP2R5BQ15173 497 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 UAP1Q16222 522 aaPredicted RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 CCDC153Q494R4 210 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 FOXR1Q6PIV2 292 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 CYTH2Q99418 400 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 APOA1P02647 267 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 EPB41P11171 864 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 ATP1A3P13637 1013 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PLEKHO1Q53GL0 409 aaPredicted RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 MCM10Q7L590 875 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PATL1Q86TB9 770 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 SPATA4Q8NEY3 305 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 CRNKL1Q9BZJ0 848 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 MRPL46Q9H2W6 279 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 KDRP35968 1356 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TBKBP1A7MCY6 615 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PSMD14O00487 310 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 BUB1O43683 1085 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 SCG2P13521 617 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 CNGA3Q16281 694 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 CWF19L2Q2TBE0 894 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 TRIM16LQ309B1 348 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 RBM41Q96IZ5 413 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 XPO6Q96QU8 1125 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 DBF4Q9UBU7 674 aaPredicted RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 RWDD2AQ9UIY3 292 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TMEM110-MUSTN1A8MSY1 372 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 ASAP2O43150 1006 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 ATP6V1G1O75348 118 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TRPC1P48995 793 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PLCB3Q01970 1234 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TUBA3CQ13748 450 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 LINC00301Q8NCQ3 95 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 RFWD2Q8NHY2 731 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TMEM87BQ96K49 555 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 LSG1Q9H089 658 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 CUEDC2Q9H467 287 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 ANKIB1Q9P2G1 1089 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 SYCE1LA8MT33 242 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 IDH1O75874 414 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 HSPA13P48723 471 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 MRPS9P82933 396 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 RESTQ13127 1097 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 CEP55Q53EZ4 464 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GSPT2Q8IYD1 628 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 PNKPQ96T60 521 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 SPC25Q9HBM1 224 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 CNNM1Q9NRU3 951 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 ZNF839A8K0R7 811 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 RBM5P52756 815 aaKnown RBP eCLIP5.44□□□□□ -1.54
SKP1-202ENST00000353411 CACNA2D1P54289 1103 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 NUP107P57740 925 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TUBA1BP68363 451 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 MDM2Q00987 491 aaPredicted RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 RASGRF1Q13972 1273 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TUBA1AQ71U36 451 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PDZD8Q8NEN9 1154 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 SDCCAG3Q96C92 435 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TMOD4Q9NZQ9 345 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 MYO5CQ9NQX4 1742 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PPIP5K2O43314 1243 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 SERPINB1P30740 379 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GRIN1Q05586 938 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 KRR1Q13601 381 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 GALNT15Q8N3T1 639 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 C8orf58Q8NAV2 365 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PROCA1Q8NCQ7 364 aaPredicted RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 ZFRQ96KR1 1074 aaKnown RBP5.44□□□□□ -1.54
SKP1-202ENST00000353411 HINFPQ9BQA5 517 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 NT5C3AQ9H0P0 336 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 TMEM165Q9HC07 324 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 GALNT8Q9NY28 637 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 PCDHA13Q9Y5I0 950 aa5.44□□□□□ -1.54
SKP1-202ENST00000353411 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.44□□□□□ -1.54
SKP1-202ENST00000353411 KRT38O76015 456 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms