RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TAF12Q16514 161 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 UNC13DQ70J99 1090 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 PARVGQ9HBI0 331 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 FAM133AQ8N9E0 248 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 HINFPQ9BQA5 517 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 COA1Q9GZY4 146 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 ZNF148Q9UQR1 794 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 SNAP23O00161 211 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 HAUS1Q96CS2 278 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 MINPP1Q9UNW1 487 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 FAN1Q9Y2M0 1017 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 PCDHA13Q9Y5I0 950 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 CACNB1Q02641 598 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 UBN2Q6ZU65 1347 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 PNMA6AP0CW24 399 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 PRDX5P30044 214 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 PPP1R2P3Q6NXS1 205 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 AFAP1L2Q8N4X5 818 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 TBC1D31Q96DN5 1066 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 ADPGKQ9BRR6 497 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 GCNT4Q9P109 453 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 NOD1Q9Y239 953 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 ZMYND10O75800 440 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 CDC27P30260 824 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 STAT2P52630 851 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 ORC2Q13416 577 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 CUL4BQ13620 913 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 CDC37Q16543 378 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 KCTD16Q68DU8 428 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 CCDC13Q8IYE1 715 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 TTC16Q8NEE8 873 aa18.61■□□□□ 0.57
TRAPPC11-201ENST00000334690 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 BFSP1Q12934 665 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 DCP1AQ9NPI6 582 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 FAM170AA1A519 330 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 STAM2O75886 525 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 CASP8Q14790 479 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 MXD3Q9BW11 206 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 ODF2LQ9ULJ1 636 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 PVALEFA0A1B0GWK0 134 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 ABCD1P33897 745 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 CCT5P48643 541 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 YARSP54577 528 aaKnown RBP18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 HACE1Q8IYU2 909 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 SYNE4Q8N205 404 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 SLC7A3Q8WY07 619 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 TMEM47Q9BQJ4 181 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 HESX1Q9UBX0 185 aa18.6■□□□□ 0.57
TRAPPC11-201ENST00000334690 MOCS3O95396 460 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 CYP19A1P11511 503 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 AP3B2Q13367 1082 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 GEN1Q17RS7 908 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 CCDC144BQ3MJ40 725 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 CCDC117Q8IWD4 279 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 PROM2Q8N271 834 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 CDHR1Q96JP9 859 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 SUGCTQ9HAC7 445 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 SRP68Q9UHB9 627 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 CLIC2O15247 247 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 EMBQ6PCB8 327 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 WHAMMQ8TF30 809 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ZNF653Q96CK0 615 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 PNPLA7Q6ZV29 1317 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 CXCR5P32302 372 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 KCNQ4P56696 695 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ALKBH5Q6P6C2 394 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 METTL13Q8N6R0 699 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ABHD10Q9NUJ1 306 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ADAMTS1Q9UHI8 967 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 FTCDO95954 541 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 SF3A3Q12874 501 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ALS2CLQ60I27 953 aa18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 INTS9Q9NV88 658 aaKnown RBP18.59■□□□□ 0.57
TRAPPC11-201ENST00000334690 ANO9A1A5B4 782 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 MEIS1O00470 390 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 DDIT3P35638 169 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 BAG6P46379 1132 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 ALCAMQ13740 583 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 UBE2SQ16763 222 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 UHMK1Q8TAS1 419 aaKnown RBP18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 NARFQ9UHQ1 456 aa18.58■□□□□ 0.57
TRAPPC11-201ENST00000334690 GMNNO75496 209 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 GDF11O95390 407 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 MXI1P50539 228 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 DBNDD1Q9H9R9 158 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 PXDNLA1KZ92 1463 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms